Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4308g00002 ATGGACTCAAACGTCGATTCAGTTACGTTGGAACAATCCAATCACAAGAAGCGCCGCAAATTCACACACCATAATTCCCTCACTCACGTCATTCCATGGACTTCTCAAACCGAACAGCGCCTCTACTCCTCCAAGCTCCTCCACGCTCTCCGCCGCATCCGTCCTCCGCCGTCCAGCCCTATCGCCGCTCGCGATGTCCGCGCCGCCGCCGACCGAGTCCTCGCCGCCACTGCCAGAGGCCGAACGCGGTGGAGCCGCGCGATTCTCGCCAGTCCGCTCGCCCGGTGGAGGCACAAGAAGGTGAAGAAGTCCGGCACCGGATTGATGAAGAAGAGGACGCCGGAGATTCGGAGAAGGTTGCCGGCGGTGCAGAAGAAAGCACGCCTTCTTGGACGGTTAATCCCCGGTTGCCGGAAGGTGTCGTTCCCGAAGCTTCTAGAAGAAGCCACTGACTATATTTCCGCCTTGGGGATGCAAGTGCGAGCCATGACGGCTCTCGCCGACCTACTCGCCGGTGCTGCGCCGCCGCCCGCTTCGCTCCGTTTAAGTTGA 552 0.6051 MDSNVDSVTLEQSNHKKRRKFTHHNSLTHVIPWTSQTEQRLYSSKLLHALRRIRPPPSSPIAARDVRAAADRVLAATARGRTRWSRAILASPLARWRHKKVKKSGTGLMKKRTPEIRRRLPAVQKKARLLGRLIPGCRKVSFPKLLEEATDYISALGMQVRAMTALADLLAGAAPPPASLRLS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4308g00002 183 CDD bHLH_AtIBH1_like 117 164 IPR044549 GO:0006355
Mupr4308g00002 183 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 156 IPR011598 GO:0046983
Mupr4308g00002 183 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 35 170 IPR044660 GO:0006355
Mupr4308g00002 183 MobiDBLite consensus disorder prediction 1 20 - -
Mupr4308g00002 183 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 117 175 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4308g00002 Mupr-Chr4308 15574 16125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4308g00002 33 163 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 52.414 8.35e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4308g00002 - - gmx:100813766 188.734