Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4304g00006 ATGTCATCAAGTGGAACTATTTGGAGCTATGAGGAAGAAAAAGCATTTGAGAATGCCATCGCTATGCATTGGATTGAGGAAGACTCAATGGAGCAATGGGAGAAAATTGCTTCAGCAGTTCCCAGCAAAAGCATGGAAGAAGTGAAGCAACATTACGAGTTACTAGTAGAGGATGTAAGAGCAATAGAGGCAGGTCATATATCATTCCCAAACTATGCTTATGAGGAAACCACATCTTCAAATAAGGACTTCCATGGCTCATCCAAGGCCACAAATTCAGATAAAAGATCAAATTGTAATTATGGAAGTGGCTTTTCTGGGTTAGGACATGACTCCACCACTACTCATAGTGGTAAAGGAGGCTTGTCAAGGTCATCAGAACAAGAAAGGAGAAAAGGAATTCCATGGACTGAGGAGGAGCACAGGTTATTTTTACTTGGTCTAGACAAGTTTGGAAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTGATTTCTAGGACTCCTACTCAAGTGGCAAGCCATGCACAAAAGTACTTCATAAGGTTGAATTCTATGAATAGAGACAGGAGGAGGTCTAGTATCCATGATATAACTAGTGTGAACAATGGAGATGTGGCTAGTAATCAAGCACCAATAACAGGGCAGCATAGTAGCACAATTTCTCCAAGTACAATGGGTGTAGGACAATCACTGAAGCATAGAGTTCAGGGTCACATACCAGCTGGTTTAGGCATGTATGGAACACCAGTTGGGCATCCTGTGGCTGCTCCTCCAGGGCATATGGCATCTGCAGTTGGCACTCCTGTCATGCTTCCTCCTGGACCCCACCCACATCCTCATCCCCATCCCCATCCCCATCCTCATCCCCATTCCCATCCTCATCATCCACCTTATGTTCTCCCTCTTGCTTACCCAATGGCACCTCCAACAATGCACCAATAA 945 0.4423 MSSSGTIWSYEEEKAFENAIAMHWIEEDSMEQWEKIASAVPSKSMEEVKQHYELLVEDVRAIEAGHISFPNYAYEETTSSNKDFHGSSKATNSDKRSNCNYGSGFSGLGHDSTTTHSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVASNQAPITGQHSSTISPSTMGVGQSLKHRVQGHIPAGLGMYGTPVGHPVAAPPGHMASAVGTPVMLPPGPHPHPHPHPHPHPHPHSHPHHPPYVLPLAYPMAPPTMHQ 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4304g00006 314 SUPERFAMILY Homeodomain-like 130 185 IPR009057 -
Mupr4304g00006 314 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Mupr4304g00006 314 SUPERFAMILY Homeodomain-like 8 62 IPR009057 -
Mupr4304g00006 314 Gene3D - 134 186 - -
Mupr4304g00006 314 CDD SANT 8 56 IPR001005 -
Mupr4304g00006 314 ProSiteProfiles Myb-like domain profile. 8 56 IPR001005 -
Mupr4304g00006 314 Gene3D - 1 69 - -
Mupr4304g00006 314 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Mupr4304g00006 314 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 182 IPR006447 GO:0003677
Mupr4304g00006 314 CDD SANT 135 180 IPR001005 -
Mupr4304g00006 314 ProSiteProfiles SANT domain profile. 3 60 IPR017884 -
Mupr4304g00006 314 MobiDBLite consensus disorder prediction 270 302 - -
Mupr4304g00006 314 Pfam Myb-like DNA-binding domain 8 52 IPR001005 -
Mupr4304g00006 314 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Mupr4304g00006 314 FunFam Transcription factor SRM1 1 69 - -
Mupr4304g00006 314 FunFam transcription factor MYB1R1 134 185 - -
Mupr4304g00006 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Mupr4304g00006 314 MobiDBLite consensus disorder prediction 280 294 - -
Mupr4304g00006 314 PANTHER TRANSCRIPTION FACTOR KUA1 4 308 - -
Mupr4304g00006 314 MobiDBLite consensus disorder prediction 102 134 - -
Mupr4304g00006 314 SMART sant 132 182 IPR001005 -
Mupr4304g00006 314 SMART sant 4 58 IPR001005 -
Mupr4304g00006 314 MobiDBLite consensus disorder prediction 102 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4304g00006 Mupr-Chr4304 11519 12668 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr4304g00006 Myb_DNA-binding 1.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4304g00006 - - gmx:100812196 539.65