Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4303g00001 ATGGGGAGTATGAGTGACTCGGACAGAAAACGGCGTCACTTTAGCTCCTTGTCCCCTACACCTGCAGCTGCTACTACGAAGAAGCTACCCTTCTTGCCCGTTTCTGAAGACAAGAAGCTAGATATTGTTGTACTTCAGTATCAAAATCAAAAACTCAGACAAAAATTAGAAACTCAGAAGTTAGAGTATGCAGCACTTGAGAATAGGTTTTCTCAACTGAAGGAAGGGCAAAAGTCATATGATTCCACTTTAGCTGTGGTCAAGAAGTCATGGGAGCAGCTGGTTAATGATTTGGAGTTGTGTTCTGAACATATGAGAGAGTCAAGCACCAACTCAAATTCTAGATTTGCAACAATCATGGAAGATGGTAGTCCATCTACTGTTCAGGATGTGTTTCTTAGCCGACTAATGCAAACTGGTGCAACTGAATGTGCCTCCACATACAACTTTGCGAGCCAGGAGCATAGAGAAATTACTACCGAAAAAGCTAAAAGCATTTTAAAAAATATAGTGACAGCTGTTAATAACCTTTGTGTTCTGTTGGATGGATTGCATGCTGCATTACTGAAAAAGCTTCCCGGAGATGTTTTGTGTAGGCAGAAATTGTCCTCTGATCTTGAGGTGAAAGTTAAAAACTTGAGATTGGAATTCAGTGAACTTCATTTAAAGCACAAGTCTTTAGCAAGTGAGTTCCAAATTCAGACAGATCTTGATGCCAAAAATAAAGCTGACCTTGAAAGATTGAAAGACCCCAAAGGATGTGAACAGAGTAGAGACTACTTACTCAATGGTATGCCAGAGTTCCACACATTGTGGGTTGGCTGGAAACATGATTGGAGTGCCATGGGTTGGCCAGAAATGCAGCTGAGAGCTCAGGGGGAACTGGCAAGCATTGTTGCAGAGTTAGAAGAAAGCAATCACAAACTTGCAACTCTTAAGGCAGAGAGAGATGCTGCAAAAGGGGCAGTTCTCCCAGTCTTAAATGTTGGAAGTACGCACATTCCTAGTGATAAGATCAGAGACAAGCAAAAGGATTTGCAAGATATGGAATCTACTTTGAAGGAGCTATTGGACCAAGGTTCAACTCGATTGGTGGAACTGAAAAGTCTTCATGAGGAAAGAGTAAGAATATTACAGCAGTTGTGTGATCTACAGAACACTTTGAAGAATTTGAAGTGTATTACTTCTTCCCATGCTTTCCAATTGGTTAGAGATCAGATAGAGAAGTCAAAATCAGAAGTTCTGGAGTATCAGGCCTTATATGAGAAACTACAGGTTGAGAAAGATAATCTTGCTTGGAGGGAGAGGGAGTGGTACATTAAAAATGATTTAGCAGATATTTTTCAAAGAACTGTGGCTGTTTCAGATTTTAGAGTGGCTGATATACGCTCTGAGATACAGAAAAAGATAGAGGAAAGAAATGTGATTGAAAATAAGCTGAAAGAGGAAGCAAGAGAACCGGGAAGGAAAGAAATTATTGCTGAATTTAAATCTCTGCTTTCTTCATTTCCTGAGGAAATGGGGTCTATGCAAAGCCAGCTAAGAAAATATAAAGAATCAGCTTCGGATATCCATTCTCTGCGTGCAGATGTGCAGTCTGTTACTAGTATTCTTGAAAGGAAGGTAAAAGAATGTGATGTATTTTCTGTTAGGTCTGCTGGTCAACTTGCTGAGATAAAGAGGCTGCTTGGTGTGGTTCAAGATTTGAGAGAGAGTGAACGGGACTTGAAGTTGATATTGGAAATGTTTAGACGTGAGTCCATTGATTCAAGGGATGTCATGGACGCCCGAGAAGCAGAATACAGAGCATGGGCATGTGTTCAAAGTTTGAAATCATCGCTTGATGAGCACAACTTAGAACTTCGAGTTAAGACGGCCAATGAAGCAGAGGCCAGATCTCAACAAAGGCTGGCTGCTGCTGAAGCTGAGATAGCAGACATGAGACATAAATTAGAAGATTCTAAAAGGCAAATGTGTGATCTATCTGATGTCTTGAAATCTAAGAACAAACAAAATGAGAACTACTTATCTGAAATAGAGAGTATTGGGCAAGCATATGACGACATGCAAACTCAAAACCAACATCTGTTGCAGCAGATTACTGAAAGAGATGATTACAATATTAAGCTTGTTTTGGAGGGTGTAAGGGCAAGACAGAAGCAGGATTCTTTACTCATGGAGAAGCGGGTAATGGAACAAGAGATCCAGCAAGCAAACATATCCCTTAATTTATATGATATGAAAGCTGCAAGAATTGAAGACCAGTTGAAGTTTTGTTCGGATCAGCTTCAAAGACTTGCAGAGGATAAGCTTCAAAGTTCTGTCACTTTGGAAAATACACAAAGAAGGCTGTCCGATATTAGAGGACAATCTCAACAGGTTAGGGATACGGTGGTGGAAATGCAATCAAAAATTGGTAGTAATCGAGTGACACGTATGGAGTTACAAGTAGAACTTGAGAAAGAAAGGTTTGCCAAGAAAAGAGTAGAGGAGGATCTGGAGGTTGCTAGGAGAAAGTTTTCACGTCTTAAAGAACAGAACGAGGGCACTTCAGTAACTGAAAAGCTTCAACAGGAACTTGAAGAGTACAGGGAAATTATCAAGTGCAGTATCTGCCAAGACAGGGCAAAAGAGGTGGTAATTACAAAATGCTACCACTTGTTCTGCTACTCATGTATCCAGAAAGTTGCTGGGAGTAGGCATCGCAAGTGTCCACAGTGTGCTACAAGCTTTGGGGCTAATGATGTTAAATCTAAAGAACTTGGAGCCATAGGAAACGTGATATTTGTTCTTTGCAGATTTATCATAATACATCTTCCAATGCGATTTGGAGAGGTCATG 2841 0.4044 MGSMSDSDRKRRHFSSLSPTPAAATTKKLPFLPVSEDKKLDIVVLQYQNQKLRQKLETQKLEYAALENRFSQLKEGQKSYDSTLAVVKKSWEQLVNDLELCSEHMRESSTNSNSRFATIMEDGSPSTVQDVFLSRLMQTGATECASTYNFASQEHREITTEKAKSILKNIVTAVNNLCVLLDGLHAALLKKLPGDVLCRQKLSSDLEVKVKNLRLEFSELHLKHKSLASEFQIQTDLDAKNKADLERLKDPKGCEQSRDYLLNGMPEFHTLWVGWKHDWSAMGWPEMQLRAQGELASIVAELEESNHKLATLKAERDAAKGAVLPVLNVGSTHIPSDKIRDKQKDLQDMESTLKELLDQGSTRLVELKSLHEERVRILQQLCDLQNTLKNLKCITSSHAFQLVRDQIEKSKSEVLEYQALYEKLQVEKDNLAWREREWYIKNDLADIFQRTVAVSDFRVADIRSEIQKKIEERNVIENKLKEEAREPGRKEIIAEFKSLLSSFPEEMGSMQSQLRKYKESASDIHSLRADVQSVTSILERKVKECDVFSVRSAGQLAEIKRLLGVVQDLRESERDLKLILEMFRRESIDSRDVMDAREAEYRAWACVQSLKSSLDEHNLELRVKTANEAEARSQQRLAAAEAEIADMRHKLEDSKRQMCDLSDVLKSKNKQNENYLSEIESIGQAYDDMQTQNQHLLQQITERDDYNIKLVLEGVRARQKQDSLLMEKRVMEQEIQQANISLNLYDMKAARIEDQLKFCSDQLQRLAEDKLQSSVTLENTQRRLSDIRGQSQQVRDTVVEMQSKIGSNRVTRMELQVELEKERFAKKRVEEDLEVARRKFSRLKEQNEGTSVTEKLQQELEEYREIIKCSICQDRAKEVVITKCYHLFCYSCIQKVAGSRHRKCPQCATSFGANDVKSKELGAIGNVIFVLCRFIIIHLPMRFGEVM 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4303g00001 947 SMART ring_2 869 907 IPR001841 -
Mupr4303g00001 947 Coils Coil 623 657 - -
Mupr4303g00001 947 Coils Coil 812 846 - -
Mupr4303g00001 947 MobiDBLite consensus disorder prediction 1 15 - -
Mupr4303g00001 947 ProSitePatterns Zinc finger RING-type signature. 884 893 IPR017907 -
Mupr4303g00001 947 Coils Coil 749 769 - -
Mupr4303g00001 947 Coils Coil 407 427 - -
Mupr4303g00001 947 Coils Coil 339 359 - -
Mupr4303g00001 947 PANTHER RING FINGER PROTEIN-RELATED 1 918 IPR013956 GO:0004842|GO:0010390
Mupr4303g00001 947 SUPERFAMILY RING/U-box 861 916 - -
Mupr4303g00001 947 MobiDBLite consensus disorder prediction 1 21 - -
Mupr4303g00001 947 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 815 927 IPR013083 -
Mupr4303g00001 947 Coils Coil 42 76 - -
Mupr4303g00001 947 Coils Coil 295 322 - -
Mupr4303g00001 947 Pfam Zinc finger, C3HC4 type (RING finger) 868 909 - -
Mupr4303g00001 947 CDD RING-HC_Bre1-like 861 918 - -
Mupr4303g00001 947 Coils Coil 459 486 - -
Mupr4303g00001 947 ProSiteProfiles Zinc finger RING-type profile. 869 907 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4303g00001 Mupr-Chr4303 5222 28568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4303g00001 866 907 C3H Transcription Factor Family AT2G42030 41.860 8.68e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4303g00001 K10696 - gmx:100790744 1520.75