Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4301g00007 ATGCAAGACATTTTCAGATCAGTTCGTCGATCACTCGTATTCCGCGGTTCGCCGGAGAACGAAGACGCCTCTCTCGGAGTCGGAGGAAGCCTCGTCGATAAGATCGGTTATTGTATCCGAAGTTCCAGAGTCTTCTCCAAAACCTCGCCGCCGTCGCCGTCCATTCCTAAGGACGCTGCACCTTCGATCCGATGGCGAAAAGGCGAGTTGATCGGTTGCGGCACCTTTGGCCAAGTCTACGTTGGAACGAATCTTGATTCCGGAGAGCTTCTAGCGGTCAAACAGGTTTTGATTGCGGCGAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCACATAAAAGAGCTTGAGGAAGAAGTTAAATTACTGAAAGACCTTTCTCATCCCAACATTGTTATATGTTTGGGTACAGTCAGAGAAGAGGACACGCTAAATATTCTCCTGGAGTTTGTTCCTGGTGGATCCATATCATCACTATTGGGGCAGTTTGGGGCTTTCCCTGAGGCTGGGGCCAATATTCTTGTAGATAATAATGGATGCATAAAACTTGCAGACTTTGGGGCATCCAAACAGGTCGTTGAGCTGGCAACCATTTCCGGTGCCAAGTCCATGAAGGGGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAAACTGGGCATAGCTTCTCTGCTGACATATGGAGCGTGGGTTGTACTGTGATTGAGATGGCCACTGGAAAGCCTCCTTGGAGTCAGCAGTACCAACAAGAGGGAACCGATTTTGAGGTCATCGGCATCAGAACTACTGCAGGTGATTCTATGAGCATTTTCTGCCATCCCTTTGTTACGGGTGAACATATGAATTCCCTTCCTCTGCCATCTAATGTCACGAACTTGGTGGAAATTTTGGTACGAGCATGCTTCACGTGTATTTTTATTCAAGCATCGACGGGGAGGCTTCCAGCTAGCAAGGACACAAGTTTGTTCAATTCTTCTCGGTTGTCTGATGGAAAAATAAGAAAATAA 1008 0.4772 MQDIFRSVRRSLVFRGSPENEDASLGVGGSLVDKIGYCIRSSRVFSKTSPPSPSIPKDAAPSIRWRKGELIGCGTFGQVYVGTNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVICLGTVREEDTLNILLEFVPGGSISSLLGQFGAFPEAGANILVDNNGCIKLADFGASKQVVELATISGAKSMKGGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEGTDFEVIGIRTTAGDSMSIFCHPFVTGEHMNSLPLPSNVTNLVEILVRACFTCIFIQASTGRLPASKDTSLFNSSRLSDGKIRK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4301g00007 335 SUPERFAMILY Protein kinase-like (PK-like) 64 254 IPR011009 -
Mupr4301g00007 335 ProSiteProfiles Protein kinase domain profile. 65 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4301g00007 335 Pfam Protein kinase domain 170 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4301g00007 335 Pfam Protein kinase domain 66 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4301g00007 335 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Mupr4301g00007 335 Gene3D Transferase(Phosphotransferase) domain 1 64 169 - -
Mupr4301g00007 335 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 169 303 - -
Mupr4301g00007 335 Coils Coil 98 125 - -
Mupr4301g00007 335 CDD STKc_MAPKKK 64 250 - -
Mupr4301g00007 335 Gene3D Transferase(Phosphotransferase) domain 1 170 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4301g00007 Mupr-Chr4301 38205 41919 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4301g00007 1 295 MAP Kinase Kinase Kinase AT3G06030 60.000 7.12e-127 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mupr4301g00007 Pkinase 3.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4301g00007 K20606 - gmx:100779001 439.499