Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr42g00003 ATGACCAACATGGAGCGAGTGATTTCATCTTTCATGGGTTTGTTTCTTCTTTGGGAAATTTTGGTGCTTGACTTAGTGCTCATGGTTTCTGGCAATGCAGAAGTTGAAGCCCTGACTGCATTCAAGTTCAATATGATTGATCCTAACGGTGTTCTTCATAGTTGGGATGCTACCATTGTCAATCCTTGCACATGGTTTCATGTTACTTGCAACAGTGAAAATAGCGTCACCCATGTTGAACTTGGAAATTCAAACCTTTCGGGTCAGCTTGTTCCACAGCTTGGTCAACTCCCAAATTTGCAATACTTGGAACTTTATAATAATAATATAACCGGGACAATCCCAGATGAGCTTGGAAGCTTGGCAAACTTGGTGAGCTTGGATCTTTACTCGAACCGCATTACTGGCTCCATTCCAGACAAATTGGCCAACATTCAAAAACTGCGCTCCCTGCGTCTGAACAATAACAGCTTGTCAGGACACATTCCTGTGCGTTTGACCACTGTTGATACGCTGAAAGTTCTCAACAACTTAACAGGAAATGTCCCAGTCAACGGTTCATTTACAATTTTTACTCCTATCAGTTTTAGGAATAATCCTTCATTGAATAATCAAAGAATTCTATCTCCACCAGCTGCTACACCGCCACCAAATCCTTCAGGTAATGCTAACAGAGCTATTGGAGCCATTGCTGGAGGAGTTGCTATTGGTGCTGCACTGTTGTTTGCAAGCCCAGTAATTGCACTTGTTTATTGGAATAGAAGGAAGCCACAGGATTATTTCTTTGATGTTGCAGCTGAGGAGGATCCTGAAGTTCACTTTGGTCAGCTTAAAAGGTTTTCACTGCATGAACTGCATATTGCAACAGATAAATTTAATAAGGAAAACATTCTTGGTAAAGGTGGATTTGGCAAGGTTTATAAAGGACGCTTAACAAATGGTGAGCTTGTAGCAGTAAAAAGACTTAACCTGGAACGCAGCCATAGTGGGGAGTTGCAATTTCAAACTGAAGTGGAAATGATCAGCATGGCTGTGCATCGAAATTTGCTTCGCCTGATTGACCGTCCAAAATCAGGACCACCACTTGAATGGCCAATACGGAAGCATATTGCTCTAGGAGCTGCTAGGGGGCTTGCTTATTTGCATGATCATTGTGATCCAAAGATTATTCATCGTGATGTCAAAGCTGCTAATATATTGTTGGATGAGTACTTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCAAAGCTTTTGGATTACAGATATACTCATGTTACTACTGCTGTATGCGGTACGATTGGCTATATAGCACCAGAGTATCTCTCAACTGGGAAGTCTTCAGAGAAGATTGATGTTTATGGATATGGCGTGATGCTTCTTGAACTAATAACTGGACAGAGCGCTTTCGATTTAGCACGACGTCCGGTTCATGATGAGATCATGTTGTTTGATTGGGTGAATGCAGTTCTGAAAGACAAGAGGTTGGATATACTGGTGGATGCCAATTTGAAGGGAAATTATGATGAAGAGGAAGTAGAGGAGGTAATCCAAGTGGCCTTGCTATGCACACAAAGCTCCCCTTTGGAAAGACCAAAGATGAGTGAGGTGGTGAGAATGTTAGAGGGTGAAGGTTTGGCAGGAAAGTGGAATGAATGGTTGCAGAAAGAGGATACCAAACAAAATTTGGAGCCCTCCAATCTCCAGGCTGCTTATTGGCCATTTGACTCAACTGCAGATATTCTACCAGATGAACTGGAACTTTATAGTAATAATATAACTGGGACAATCCCAGATGAGCTTGGAAGTTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACCATATTACTGGTTCCATTCCAGACAAATTGGCCAACCTTAAAAAACTGCGATTCCTTTTTAGGGATAATCCTTTCTTGAAAAATATGAGCATTCTTGCTCCACCAGCTGCTACACCGCCACCAACTCCTTCAGGTAATAGTAACCATGCTATTGGAGCCATTGCTACTGGAGTTGCTCTGGTAACTGCACTGTTGATTGCAGCCCCAGTAATTGTACTTGTTTATTGGAAAAGAAGGAAGCCACAGGATTATTTCTTTGATGTTGCAGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCACTGCGCGAACTGCAAGTTGCAACAGATACCTTTAATAACAAAAACATTCTAGGTAGAGGTGGATTTGGCAAGGTTTATAAAGGACGCCTAACAAATGGGGATCTTGTAGCAGTAAAAAGACTTAAAGAGGAACGCACTCAGGGTGGGGAGATGCAATTTCAAACTGAAGTGGAAATGATCAGCATGGCTGTGCATCGAAATTTGCTTCGCCTGCGTGGTTTTTGTATGACGCCTACTGAACGCTTGCTTGTGTATCCTTTCATGGTTAATGGAAGTGTAGCTTCATGTTTACGAGACCGTCCGGAATCACAACCACCACTGGAATGGACAATACGGCTGCGTATTGCTCTAGGAGCTGCTAGGGGGCTTGCTTATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTCAAAGCTGCTAATATATTGTTGGATGAGGACTTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCAAAGCTTATGGATTACAAAGATACTCATGTTACTACTGCTGTACGCGGTACGATTGGCCATATAGCACCAGAGTATCTCTCAACTGGGAAGTCTTCAGAGAAGACTGATGTTTTTGGATACGGTGTTATGCTTCTTGAACTAATAACTGGACAGAGGGCTTTCGATTTAGCACGACTCGCCAATGATGATGATGTCATGTTGCTTGATTGGGTGAAAGCACTTCTGAAAGACAAGAGGTTGGAGACACTGGTGGATGCAGATTTACAGGGAAATTATGAGGAAGAGAAGGTAGAGGAGTTAATCCAAGTGGCCTTGCTGTGCACACAAGGCTCCCCTTTGGAAAGACCAAAGATGTCTGAGGTGGTGAGAATGCTAGAGGGTGAAGGTTTGGCAGAAAAATGGGATAGATGGTGGCAGAAAGAGGATATGATCCAACAAAGTTTTGACCCCTCCAATCTTCACGCTGCTTATTGGCCATTATTAGACTCANNCCACCTGATGAACTGTCAGGTCCTAGATGATCTCTCAAAGCTGCAAAATGTTGGTTTAATGGACTGTATTACTCTTTCTCTTGGGATCTTGATTGAATATGACAATGCTTTCCACCTCTTCTTCATTCAATTCAATGTTCTTCCACAATTCCATATTTTACTGAGGATCCTAGGCATTTTTAAAAAAAGATTAACTAATTCAACAGATCTACCACTCCTAGTTGCTAGAACCTTCCAAAATTCTTCGTGTGTTTCTGCAGAAGATTCAGCATCTTCACTGAATGAGCTATCTGGTGATGACAATATTGAATGGGAGAAAGCTGACTCAGCA 3459 0.4201 MTNMERVISSFMGLFLLWEILVLDLVLMVSGNAEVEALTAFKFNMIDPNGVLHSWDATIVNPCTWFHVTCNSENSVTHVELGNSNLSGQLVPQLGQLPNLQYLELYNNNITGTIPDELGSLANLVSLDLYSNRITGSIPDKLANIQKLRSLRLNNNSLSGHIPVRLTTVDTLKVLNNLTGNVPVNGSFTIFTPISFRNNPSLNNQRILSPPAATPPPNPSGNANRAIGAIAGGVAIGAALLFASPVIALVYWNRRKPQDYFFDVAAEEDPEVHFGQLKRFSLHELHIATDKFNKENILGKGGFGKVYKGRLTNGELVAVKRLNLERSHSGELQFQTEVEMISMAVHRNLLRLIDRPKSGPPLEWPIRKHIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLDYRYTHVTTAVCGTIGYIAPEYLSTGKSSEKIDVYGYGVMLLELITGQSAFDLARRPVHDEIMLFDWVNAVLKDKRLDILVDANLKGNYDEEEVEEVIQVALLCTQSSPLERPKMSEVVRMLEGEGLAGKWNEWLQKEDTKQNLEPSNLQAAYWPFDSTADILPDELELYSNNITGTIPDELGSLTNLVSLDLYLNHITGSIPDKLANLKKLRFLFRDNPFLKNMSILAPPAATPPPTPSGNSNHAIGAIATGVALVTALLIAAPVIVLVYWKRRKPQDYFFDVAAEEDPEVHLGQLKRFSLRELQVATDTFNNKNILGRGGFGKVYKGRLTNGDLVAVKRLKEERTQGGEMQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRDRPESQPPLEWTIRLRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKALLKDKRLETLVDADLQGNYEEEKVEELIQVALLCTQGSPLERPKMSEVVRMLEGEGLAEKWDRWWQKEDMIQQSFDPSNLHAAYWPLLDSXHLMNCQVLDDLSKLQNVGLMDCITLSLGILIEYDNAFHLFFIQFNVLPQFHILLRILGIFKKRLTNSTDLPLLVARTFQNSSCVSAEDSASSLNELSGDDNIEWEKADSA 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr42g00003 1153 FunFam Somatic embryogenesis receptor-like kinase 1 807 1025 - -
Mupr42g00003 1153 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Mupr42g00003 1153 Gene3D Transferase(Phosphotransferase) domain 1 807 1024 - -
Mupr42g00003 1153 Gene3D Transferase(Phosphotransferase) domain 1 351 559 - -
Mupr42g00003 1153 ProSitePatterns Protein kinases ATP-binding region signature. 736 758 IPR017441 GO:0005524
Mupr42g00003 1153 FunFam Somatic embryogenesis receptor kinase 1 699 806 - -
Mupr42g00003 1153 Pfam Protein tyrosine and serine/threonine kinase 733 1004 IPR001245 GO:0004672|GO:0006468
Mupr42g00003 1153 Gene3D Phosphorylase Kinase; domain 1 261 350 - -
Mupr42g00003 1153 Gene3D Phosphorylase Kinase; domain 1 699 806 - -
Mupr42g00003 1153 SMART serkin_6 730 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr42g00003 1153 SMART serkin_6 292 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr42g00003 1153 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Mupr42g00003 1153 SMART LRR_sd22_2 97 118 - -
Mupr42g00003 1153 SMART LRR_sd22_2 603 629 - -
Mupr42g00003 1153 SMART LRR_sd22_2 121 147 - -
Mupr42g00003 1153 MobiDBLite consensus disorder prediction 202 221 - -
Mupr42g00003 1153 FunFam Somatic embryogenesis receptor kinase 1 30 215 - -
Mupr42g00003 1153 Pfam Protein kinase domain 368 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr42g00003 1153 Pfam Protein kinase domain 292 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr42g00003 1153 ProSiteProfiles Protein kinase domain profile. 292 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr42g00003 1153 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 20 550 - -
Mupr42g00003 1153 FunFam Somatic embryogenesis receptor kinase 1 261 355 - -
Mupr42g00003 1153 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mupr42g00003 1153 ProSiteProfiles Protein kinase domain profile. 730 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr42g00003 1153 ProSitePatterns Serine/Threonine protein kinases active-site signature. 853 865 IPR008271 GO:0004672|GO:0006468
Mupr42g00003 1153 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Mupr42g00003 1153 SUPERFAMILY L domain-like 33 202 - -
Mupr42g00003 1153 FunFam Somatic embryogenesis receptor-like kinase 1 343 560 - -
Mupr42g00003 1153 SUPERFAMILY Protein kinase-like (PK-like) 710 1005 IPR011009 -
Mupr42g00003 1153 SUPERFAMILY L domain-like 584 641 - -
Mupr42g00003 1153 SUPERFAMILY Protein kinase-like (PK-like) 272 541 IPR011009 -
Mupr42g00003 1153 Gene3D Ribonuclease Inhibitor 31 209 IPR032675 -
Mupr42g00003 1153 Gene3D Ribonuclease Inhibitor 560 648 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr42g00003 Mupr-Chr42 13724 38409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr42g00003 585 633 Receptor kinase-like Gene Family AT4G33430 75.510 8.55e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mupr42g00003 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr42g00003 K13416 - gmx:100804180 853.973