Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4295g00007 ATGAACGGCGATCTGTACCGGTTCGCGGTTTCATCCCACTTAAGCAATTTCCCAAGATCGTTCTCACTTCGGAAGAAAGTGCCGTGGTGGTACCAAATCCTGGACCCTCGTTCGAGGTTCGTGGCCAAATGGAACCGAACGTTCTTCTACGTGTCCATTGCGGCGCTGTTCTTGGACCCTCTCTACTTCTACTTCCCCATCACCGGGGACAAGGCCTGCATGCAAACCGACATGGTTCTCGGCGTTTTTGTCACCTTCTCCCGCACCGTCGCCGACCTCTTCTTCCTCAACCACATGGTCCTCAAGTTCCGCACCGCCTTCGTTTCTCCCCTCTCTCGCGTCTATGGCCGCAACGAACTCATCACCGATCCTCGCCAAATCGCCACCCGCTACCTCAAGTCCGATTTCATTGTCGATCTCCTCGCCACCCTTCCTCTGCCTCAGATAGTGATCTGGTTCGTGATTCCGGCTCTGAAAAATTCGACGGTGGCTCATGTAAATCACACCCTGTCCTTGATTGTCCTCATTCAGTTTATTCCTCGGTTGTTTCAGATTTTTCCTCTGCAACGTAGAATCTTGAAGACTAGTGGGCTTATTGCCAAAACTGCCTTGGCAGGGGCTTTATACAATCTTGGTTCCTACATGCTAGCCAGCCATGTTTTAGGAGCTTCGTGGTACGTGTCATCGATTCAGCGGCAGTACGAGTGTTGGAGAATAATATGCAAAAAGGAGATGAACAGAACGCACTCTCCATCTTGTAACCTTTCGTTTCTCGACTGTGCATCCCTGTTCGACGATGAACGCAAAGTTTGGTTTAAACGCACCAGAGTTCTCAGTGATTGCGATGCCCTCAATGATAAAAACCAGTTTCAGTTTGGAATGTTCGCTGAGGCCTTCACCGATCACGTCTCTTCCTCAAGATTCTTCCAAAAATACTTTTACTGTCTCTGGTGGGGTTTGAAGAATCTAACACATCAACGCACTAAATATTTTCGTATTCGTATTGAACCTCTTTTTGCCACGTGTAGTTCATACGGACAAGGTCTTCAAACTAGCACATACAGTGGTGAAACGTTATTTTCAAGTTTCATATGCATCGCTGGTCTAATCCTGTTTGCGCATCTCATTGGTAACATGCAGAACTATCTGCAATCTACAACTGCAAGAGTTGAAGAGTGGAGACTTAAACAGAAAGATACAGAAGAGTGGATGAATCACCGCCAGCTTCCACCAGAACTGCAACAACGTGTTCGGCGATTTGTTCAATATAAATGGCTTGCAACCAGAGGAGTAGACGAAGAAGCCATTTTGCGCGCTTTGCCTTTGGACCTCCGCCGCCAGATTCAGCGGCATCTCTGTCTTGACATTGTTCGTCGGGTTCCTTTCTTTGGGCAAATGGATAATCAGCTTCTAGACGCTATATGCGAACGCCTGGTTTCATCCCTGAACACAAAAGACACGTTCATCACTCGCGAAGGCGACCCGGTGAGGGAAATGCTTTTCATAATCAGAGGGCAAATGGAGAGTTCCACCACCGACGGTGGCAGGACGGGATTCTTCAACTCCATCACTCTCAGGCCCGGCGACTTCTGCGGCGAGGAATTACTGACGTGGGCTTTGGTGGCTTCTTCAAGTCTGAACCTCCCATCCTCCACTCGAACGGTGAAGAGCCTCACAGAAGTGGAGGCGTTCGCGCTGAGAGCGGAGGACCTCAAGTTCGTGGCCAGCCAGTTCAAGCGCCTCCACAGCAAGAAACTTCAGCACGCGTTTCGATACTATTCACATCAGTGGAGAGCATGGGGGATCCACATTATACAAGCTGCATGGAGGCGCCACCGCAAGAGGAAGTTGGCAATGGAGTTGATGGGTAAAGAGAACTTGTACTACACTAACGTGGTGGAGATAGAAGTGGACGAGGAAGAAGGAACTAGTGCGAGTGGGAGTTCCACGGGACATATGCAGCATCTTAGTGCTACAGTTTTGGCTTCCAAGTTTGCTGCACACACCAGGAAAAGAGTATTTAAAAAGGTCAAAATTAAAATGCCTGATGCCAGCAGTTTGAAGATGCCCAAGATGTTCAAGCCAACGGAACCTGATTTCTCCACATTCCAATAG 2115 0.4884 MNGDLYRFAVSSHLSNFPRSFSLRKKVPWWYQILDPRSRFVAKWNRTFFYVSIAALFLDPLYFYFPITGDKACMQTDMVLGVFVTFSRTVADLFFLNHMVLKFRTAFVSPLSRVYGRNELITDPRQIATRYLKSDFIVDLLATLPLPQIVIWFVIPALKNSTVAHVNHTLSLIVLIQFIPRLFQIFPLQRRILKTSGLIAKTALAGALYNLGSYMLASHVLGASWYVSSIQRQYECWRIICKKEMNRTHSPSCNLSFLDCASLFDDERKVWFKRTRVLSDCDALNDKNQFQFGMFAEAFTDHVSSSRFFQKYFYCLWWGLKNLTHQRTKYFRIRIEPLFATCSSYGQGLQTSTYSGETLFSSFICIAGLILFAHLIGNMQNYLQSTTARVEEWRLKQKDTEEWMNHRQLPPELQQRVRRFVQYKWLATRGVDEEAILRALPLDLRRQIQRHLCLDIVRRVPFFGQMDNQLLDAICERLVSSLNTKDTFITREGDPVREMLFIIRGQMESSTTDGGRTGFFNSITLRPGDFCGEELLTWALVASSSLNLPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRAWGIHIIQAAWRRHRKRKLAMELMGKENLYYTNVVEIEVDEEEGTSASGSSTGHMQHLSATVLASKFAAHTRKRVFKKVKIKMPDASSLKMPKMFKPTEPDFSTFQ 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4295g00007 704 ProSiteProfiles cAMP/cGMP binding motif profile. 462 592 IPR000595 -
Mupr4295g00007 704 FunFam Cyclic nucleotide-gated ion channel 1 460 578 - -
Mupr4295g00007 704 Gene3D Helix hairpin bin 388 453 - -
Mupr4295g00007 704 Pfam Cyclic nucleotide-binding domain 485 573 IPR000595 -
Mupr4295g00007 704 SMART cnmp_10 462 593 IPR000595 -
Mupr4295g00007 704 FunFam Cyclic nucleotide-gated ion channel 1 389 453 - -
Mupr4295g00007 704 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 26 700 - -
Mupr4295g00007 704 CDD CAP_ED 462 593 IPR000595 -
Mupr4295g00007 704 SUPERFAMILY cAMP-binding domain-like 391 587 IPR018490 -
Mupr4295g00007 704 Pfam Ion transport protein 44 390 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr4295g00007 704 Gene3D Jelly Rolls 460 580 IPR014710 -
Mupr4295g00007 704 Gene3D - 51 386 - -
Mupr4295g00007 704 SUPERFAMILY Voltage-gated potassium channels 35 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4295g00007 Mupr-Chr4295 51149 53697 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4295g00007 10 700 Ion Channels AT3G48010 63.268 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4295g00007 K05391 - gmx:100783672 1230.31