Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr4288g00004 | GCTTGTGCTGTTATGAAAGTGACTGCAAATGGACAAACAATCTGGGGATTCTTCATCAGCTCATGCTGCTGCAGTTTGTATGTTGTTTCTGTAGGTCCATTTGAGATTTCCTCACTTAATGTTCGAAAAAAGGTGGGAAGCAGTGCATGGGGAATACCACGTGCCACTGATGTGTTCCATGATTCAAGTGATGTTAGCTTGTTTTCTATAGATTTGATCGATTCTGAAAATTATGGTCAACCAGTCGATGATAACTTGCTAACATTAGATAAAGTTCACAAAGAGGATGAGGGAGATAACCCTTTTGACGATTTTGAAACCAATGCAATTGGGAACATGCTTCCCGATGATGAAGAGGAGCTTTTAGCTGGGATTATGGATGATTTTGACTTAAGTAAATTGCCCAGCCAACTGGAGGATCTGGATGAAAATGATCTGTTTGTCAATGGAGGGGGATTTGAGATGGATTTTGAATCCCAAGAGAGCCTTAATATTGGTATGTCCAATATAAGCATATCAGATGTTGCTTCAAATGGTATTGGTCCCTATGCAATCCCGAATGGTGTGGGAACAGTGGCTGGGGAGCATCCCTATGGAGAGCATCCATCAAGGACATTATTTGTTCGAAACATCAACAGTAATGTCGAGGATTCTGAATTACGAATACTATTCGAGCAATATGGGGATATCAGAACTTTGTACACAGCATGCAAGCATAGGGGCTTTGTGATGATATCTTACTACGACATTCGAGCTGCTCGCACTGCCATGCGAAGTTTACAAAACAAGCCCTTGAGACGTAGAAAACTTGATATTCATTTTTCAATTCCTAAGGATAACCCCTCAGAAAAAGATATTAATCAAGGAACCCTTGTAGTGTTCAATTTAGATCCATCAGTATCAAATGACGACCTTCGTCAAATATTTGGGGCTTATGGCGAGGTCAAGGAGATTAGGGAAACACCACATAAGAGACACCATAAATTTATTGAATTTTATGATGTTAGAGCAGCCGAGGCAGCTCTTAAAGCATTAAATCGAAGTGATATTGCTGGGAAACGCATAAAACTTGAACCCAGTCGCCCTGGTGGAGCACGTCGAAACTTGATGCAACAACTGACTCAAGAACTGGATCAAGATGAAGCTCGAACTTTTAGACATCAAGTAGGTTCACCCATGGCAAATTCTCCTCCCGGTAGCTGGGCACAGTTTGGTAGTCCGGTTGAACATAATCCATTAGGTTCTTTTAGCAAGTCCCCTGGTTTGGGTCATGCCAGTCCCATTAATACCAACCATTTGTCTGGATTGACTGCAATTCTTTCCCCACATGCAACAACCTCTACCAAGATTGCACCGATTGGCAAGGACCCTGGAAGGGCTGTAAATCAGATGTTTGCAAACTCCGGATCAACACAAGGAGCAGCTTTTCAGCACTCTAGATCCTTTCCTGAGCAAAATGTAAATGCAAGTCCTAGGCCTATATCTACTTTTGGTGAATCAAGTTCAAGTGCATCAAGTATTGGAACACTGTCCGGTCCTCAATTTCTTTGGGGAAGCCCGAGTCCTTACTCTGAGCATTCAAACACTTCTGCCTGGTCTTCGTCTTCTGTGGGGCTTCCATTTACATCTAGTGTCCAACGGAAGGGTTTCCCATATGCTAGTCATCGCAGTCCTTTTATTGGCTCTCACTCCCATCATCATGTTGGATCTGCTCCTTCTGGCATTCCTCTTGATAGGCATTTTAGCCACTTCTCTGAGTCACCTGAAGCTTCTCTCATGAGCCCACTTGCATTTGGGAATTTAAATCACAGTGATGGAAATTTTATGATGAACATGGGTGCTCGTGCATCTGTAGGAGCTGGTGTTGGCCTCTCGGGAAATACCACTGAAATTAGTTCATCCAATTTCAGAATGATGTTGCTGCCTAGGCATGGTTCCTTGTTCCATGGAAATAGTTCATACTCTGGACCAGGAGCAATGAACATTGAGGGATTAGCTGAACGTGGACGAAGTAGACGTCCTGACAATGGCGGAAACCAAATTGATAGTAAGAAGCTGTACCAGCTTGACCTAGACAAAATCATCAGTGGTGAGGATACAAGGACTACTTTAATGATTAAAAACATTCCTAACAAGTATACATCGAAGATGCTGCTTGCTGCAATTGATGAGAATCACCGGGGTACTTATGACTTCCTCTACTTGCCAATTGACTTTAAGAATAAGTGTAATGTGGGTTATGCTTTTATCAATATGGCGTCTCCTTCACACATCATCCCCTTCTATAAGGCCTTTAATGGGAAAAAGTGGGAGAAGTTCAACAGCGAAAAGGTTGCTTCACTGGCATATGCACGGATACAAGGAAAGGCTGCGCTTGTGATGCATTTCCAGAATTCAAGCTTAATGAATGAGGACAAACGGTGCCGGCCAATTCTCTTCCATTCTGAGGGCCAAGATACTGGTGACCAGGAACATTTTCTATCCAGCAATTTGAATATATGCATTCGTCAACCGGATGGATCTTATTCGGGCGATTTGTTGGAGAGTCCAAAGGGCTATTCGGATCTGAAGCTAGAGAAAGATTAA | 2586 | 0.4277 | ACAVMKVTANGQTIWGFFISSCCCSLYVVSVGPFEISSLNVRKKVGSSAWGIPRATDVFHDSSDVSLFSIDLIDSENYGQPVDDNLLTLDKVHKEDEGDNPFDDFETNAIGNMLPDDEEELLAGIMDDFDLSKLPSQLEDLDENDLFVNGGGFEMDFESQESLNIGMSNISISDVASNGIGPYAIPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRILFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLTQELDQDEARTFRHQVGSPMANSPPGSWAQFGSPVEHNPLGSFSKSPGLGHASPINTNHLSGLTAILSPHATTSTKIAPIGKDPGRAVNQMFANSGSTQGAAFQHSRSFPEQNVNASPRPISTFGESSSSASSIGTLSGPQFLWGSPSPYSEHSNTSAWSSSSVGLPFTSSVQRKGFPYASHRSPFIGSHSHHHVGSAPSGIPLDRHFSHFSESPEASLMSPLAFGNLNHSDGNFMMNMGARASVGAGVGLSGNTTEISSSNFRMMLLPRHGSLFHGNSSYSGPGAMNIEGLAERGRSRRPDNGGNQIDSKKLYQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMASPSHIIPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTGDQEHFLSSNLNICIRQPDGSYSGDLLESPKGYSDLKLEKD | 861 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr4288g00004 | 861 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 289 | 362 | IPR000504 | GO:0003723 | |
Mupr4288g00004 | 861 | SUPERFAMILY | RNA-binding domain, RBD | 201 | 364 | IPR035979 | GO:0003676 | |
Mupr4288g00004 | 861 | SUPERFAMILY | RNA-binding domain, RBD | 703 | 788 | IPR035979 | GO:0003676 | |
Mupr4288g00004 | 861 | CDD | RRM1_MEI2_like | 203 | 279 | IPR034453 | - | |
Mupr4288g00004 | 861 | SMART | rrm1_1 | 703 | 779 | IPR000504 | GO:0003723 | |
Mupr4288g00004 | 861 | SMART | rrm1_1 | 205 | 273 | IPR000504 | GO:0003723 | |
Mupr4288g00004 | 861 | SMART | rrm1_1 | 290 | 358 | IPR000504 | GO:0003723 | |
Mupr4288g00004 | 861 | FunFam | MEI2-like protein 5 isoform 2 | 193 | 287 | - | - | |
Mupr4288g00004 | 861 | Gene3D | - | 288 | 385 | IPR012677 | - | |
Mupr4288g00004 | 861 | Pfam | RNA recognition motif 2 | 701 | 797 | IPR007201 | - | |
Mupr4288g00004 | 861 | Gene3D | - | 193 | 287 | IPR012677 | - | |
Mupr4288g00004 | 861 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 106 | 828 | - | - | |
Mupr4288g00004 | 861 | CDD | RRM3_MEI2_like | 704 | 789 | IPR034454 | - | |
Mupr4288g00004 | 861 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 204 | 277 | IPR000504 | GO:0003723 | |
Mupr4288g00004 | 861 | MobiDBLite | consensus disorder prediction | 474 | 505 | - | - | |
Mupr4288g00004 | 861 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 291 | 356 | IPR000504 | GO:0003723 | |
Mupr4288g00004 | 861 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 206 | 270 | IPR000504 | GO:0003723 | |
Mupr4288g00004 | 861 | CDD | RRM2_MEI2_like | 288 | 358 | - | - | |
Mupr4288g00004 | 861 | FunFam | Protein MEI2-like 1 | 288 | 383 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr4288g00004 | Mupr-Chr4288 | 24022 | 32578 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr4288g00004 | 199 | 512 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 23.919 | 7.07e-11 | 63.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr4288g00004 | - | - | gmx:100812324 | 1537.32 |