Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4285g00001 ATGGAGCAGTATGAAATACTTGAGCAAATTGGAAAAGGTGCTTTTGGTTCTGCGCTTCTTGTGAGACACAAGCATGAGAAGAAAAAATATGTGTTGAAGAAGATTCGCCTTGCTCGGCAAACTGAACGCTCTCGCAGATCTGCGCACCAGGAGATGGAGCTCATCTCTAAATTAAGAAACCCATTCATCGTGGAGTACAAAGATTCATGGGTAGAAAAGGGTTGCTATGTCTGCATCATTATAGGTTATTGTGAGGGAGGAGATATGGCGGAAGCTATAAAGAAAGCTCATGGTGTCCTGTTTCCTGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCTCTTGACTACTTGCACATGAACCACATTCTTCACCGTGATGTCAAGTGTTCGAATATCTTCTTGACCAAAGATCGTGACATACGGCTCGTGATCAATGATGAAGCAGGTGATTTTGGACTTGCCAAAATGTTGACTTCTGATGATCTTGCTTCCTCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAATCGGATATTTGGTCTTTGGGATGTTGTATATATGAAATGACAGCGCACAAGCCTGCATTTAAAGCATTTGATATACAAGCATTGATTAACAAGATTAACAAGTCCATAGTGGCTCCACTGCCAACAAAATATTCTAGTTCATTTCGAGGTCTTGTTAAAAGTATGCTGCGGAAAAATCCAGAACTTAGGTCCAGTGCTTCGGAGCTGCTTGGGCACCCACATCTTCAACCTTATGTTCTCAAGGTCCATCTCAAAATCAATAGCCCCAGGCGAAGCACATTGCCAGTTCATTGGCCAGAATCCAACTACATGAAGAAAACTAGATTTTTGGTGCCAGAAGATGATCCTGTTTCCATCTATAGGGATAAGCGACATTCTTTCAGCAATGATCGGACTCTAAATCCTAGTGTATCTGGAGCTGATCAAGACTCTATATGCTCTACTCTAGAAATAGATTGTACTCCTGACCATTTCAATAAAAGGTTAGCAGAACTACGTATTGGAGATAGCCATGAAGTGAAGTCAATCCAGAAGCCTGTTGTTTCCAGAACTTCTGGCATTTCTAAGACTCCAAGAATCACTTCCTCAAAAGTCTCAGCCACCAATAAGAAATCAATAGAATCCTCAAAGAATCGTAAGGCGCTTCCTCTTTCACACACCACCACCAAATATGCTAATACTAATCGCAGAGCATCATTTCCACTGCCAACAAGGGGTGGTATTCGGAAGCCTCCTTGTAGGTCCAATGGCAGTTTGCTTAGTCACGTGTCTTCACCAAATATCTCAGTCAATTCTCCACGAATTGATAAGATGGCTGAATTCCCATTAACTTCATATGAAGATTCTTTGTTCCCTATCAATAGAACATCATCCTGTGCACGAGGTTCCTCAGGCTTCCCATCTCATGGCAACCATTCGACTGTGATAGATAAATGCACGGTAGAGGTATATGACAGAGCCTCTAATAGACCTGGTTGTATGGATTCTTGGCAGGGAATCAAGCAGAGCATGTTAAAGGAAGTTGATGAGGATAAAAGTGGTTCCTCTAATCAAAATGCAACAGCAGGTGCTTCAAGCCACACCTCTTCTGACTTGCGCCGTCGACAATTTGACCCGTCATCATTCCAACAAAGGGCTGAAGCTTTAGAAGGGTTGCTTGAATTTAGTGCAAGATTGCTACAGCAGGCAAGGTATGATGAACTTGGGGTTCTGTTGAAACCATTTGGACCTGGAAAGGTTTCCCCAAGGGAAACTGCTATCTGGTTGAGTAAGAGCTTCAAAGAGAACACTTTCAACCCGGAAGAATCCATCATAATATTATAA 1890 0.4243 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAHGVLFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDRDIRLVINDEAGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTAHKPAFKAFDIQALINKINKSIVAPLPTKYSSSFRGLVKSMLRKNPELRSSASELLGHPHLQPYVLKVHLKINSPRRSTLPVHWPESNYMKKTRFLVPEDDPVSIYRDKRHSFSNDRTLNPSVSGADQDSICSTLEIDCTPDHFNKRLAELRIGDSHEVKSIQKPVVSRTSGISKTPRITSSKVSATNKKSIESSKNRKALPLSHTTTKYANTNRRASFPLPTRGGIRKPPCRSNGSLLSHVSSPNISVNSPRIDKMAEFPLTSYEDSLFPINRTSSCARGSSGFPSHGNHSTVIDKCTVEVYDRASNRPGCMDSWQGIKQSMLKEVDEDKSGSSNQNATAGASSHTSSDLRRRQFDPSSFQQRAEALEGLLEFSARLLQQARYDELGVLLKPFGPGKVSPRETAIWLSKSFKENTFNPEESIIIL 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4285g00001 629 MobiDBLite consensus disorder prediction 419 442 - -
Mupr4285g00001 629 MobiDBLite consensus disorder prediction 529 561 - -
Mupr4285g00001 629 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 576 - -
Mupr4285g00001 629 MobiDBLite consensus disorder prediction 370 401 - -
Mupr4285g00001 629 CDD STKc_Nek 3 264 - -
Mupr4285g00001 629 ProSiteProfiles Protein kinase domain profile. 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4285g00001 629 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mupr4285g00001 629 Gene3D Transferase(Phosphotransferase) domain 1 84 278 - -
Mupr4285g00001 629 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mupr4285g00001 629 Pfam Protein kinase domain 4 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4285g00001 629 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Mupr4285g00001 629 SUPERFAMILY Protein kinase-like (PK-like) 1 310 IPR011009 -
Mupr4285g00001 629 MobiDBLite consensus disorder prediction 536 552 - -
Mupr4285g00001 629 SMART serkin_6 4 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4285g00001 629 FunFam Serine/threonine-protein kinase Nek3 86 338 - -
Mupr4285g00001 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4285g00001 Mupr-Chr4285 6321 13652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4285g00001 10 265 MAP Kinase Kinase Kinase AT1G53570 31.418 5.05e-34 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mupr4285g00001 Pkinase 1.9e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4285g00001 K08857 - gmx:100804898 1155.2