Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr427g00007 ATGTCATCATCATCGAATTGTGGAAGGAAGACCAAGATGTTTGGAATGTGTTGCGATGGTGATGATGATGTTCATAGGCGAGACACAGATGAGAGAGAAATTGACAAAGTAGAAGATGTTAGCCAATACAGCCTCAACGGCATTCTTCTTCCCTCTCTTGGCGTCACCACTGGCCGCAACGGTAGCCGTAGACCAAAGCTTCGCCGTTACGTTATCTCTCCCAATAATCATCGGTATAGACTATGGAACAAGTTTCTGGTGATATTGGTTTTTTACACTGCTTGGATGTGTCCATTTGAATTTGGTTTCCTTGAGAGATCAAAGGGTGCAATGTCTATAATCGACAATGTAGTAAATGGTTTTTTTGCCATTGACATTGTGCTCACTTTCTTCGTTGCATACCTTGATAAGTCCACTTATTTGCTCATTGACGACCACAAGCTCATTGCTTTGAGATATGCTAAATCCTGGATGATCTTTGATGTCATTGCAACCATTCCTTATGAAGTTATTCGTATTATTATGCCTCCTTCTCTTCAAATATATAGTTACTTCAATATTCTTCGCCTTTGGCGCCTCCATCGAGTTAGTGCCATGTTTGCAAGATTGGAAAAAGACAGGAATTATAGTTACTTTTGGGTGCGTTGTTGCAAGCTTACATGTGTTACTCTATTCTCAGTGCATGCTGCTGCATGCTTTTTCTATTTTCTTGCTGCACGGGATAATCCAGAAACTACATGGCTTGGACTAGTTCCTGCTGCCATTGACCAAAATCTATGGGGAAAATATGTAGTAGCAATATATTGGTCCATAGTAACTCTTGTATCAGTTGGTTATGGTGATCTACATCCTGTAAATACAAAAGAAATGGTATTTGACATTTTGTATATGCTCTTTAATCTTGGACTCACCTCATATCTGATAGGCAACATGACCAACTTGGTTGTCCACTGGACAGAGAGAACTAAGAGATATAGGTTCATTGATTATATAATTGTAATTGAAAATAGAGATACTGTCCAATCTGCATCAAATTTTGCCAAAAGGAATCATTTGCCTTTTCGGTTGAAAGAACAAATATTTGCTCATTTGCTTATGAAGTACAGAACTGATTTAGAAGGACTACAACAACAAGAGATCATTGATTCCCTTCCTAAAGCCATTCAGTCTAGCATCTCACACTATTTATTCTATTCACTTATTGACAAAGTGTACTTGTTTCACGGAGTGACAAATGACCTACTTTTTCAAATGGTCACAGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAAAATGAAGCACCAACAGACTTTTATATATTCATTACTGGAGCTGCCGATCTTATCATTCATAAGAATGGAATGGAACAGGTTGTTGGCGAGGTAAGGCCAGGAGATGTAGTCGGGGAAACTGGAGTGTTGTGTTATAGGCCACAATTGTTTACAGTTCGGACCAAGCGATTAAGCCAGATTTTGCGTTTGAATCGGACTGTATTTATAAATCTTACTCATTCAAATGTTGGAGACGGAACAATAATCATGAACAATTTTCTTCAATATTTACATCAATCAGGGGATCCATTAATGAGAGGAATTTTGGCAGAAACAGAAGCAATGTTGGCTAGGGGCAAATTGGATTTGCCTATTATTAGTAGAGGTGATGATATATTCTTGCATAAATTGCTGAAGAAAGGTTCAGATCCAAATGAAGTAGATACAAATGGAAAGACAGCATTGCATATTGCAGCTTCTAAAGGCAATGACCATTGTGTAGCTTTGCTTCTAGAACATGGGGCTAATCCCAACATCACTGATTTAGATGGAAATGTCCCAATATGGGAAGCAATGAAGGGTGGGCACAAATCTATAATGAAACTTCTTGTAGACAATGGTGCAGACATATCATTTGCTGATGTAGGTTATTTTTCATGCATGGCTATTGAGCAAAATAATTTAGAATTACTCAAAGGCATTGTTCAATGTGGTGGTGACTTGACACAACCCATGAACAATAGAAGCACTGCACTCCATGCTGCAGTGTGTGAAGGAAATGTTGAAATAGTGAAGTTCCTTCTAAGCATAGGAGCAGACATTGATAAGGAAGATGCTAATGGAATGAGTCCAAGGTATTTAGCAGATCATCAAGGTCACCAAGAAATACTAGACATATTCCAGAAAGTTGAACACAACAAAGCAACACACGATATCCCTGCACCATCCTTTATTGGGAGGTATCAAAGTGAACCCACTATATCAACCATTCCCCAAGTAAGCAAGCCACCTATTCAAGAATTAACATGGTTTGATAATCGTCATAGAAGAACGGTCAGCCCTTTCCATAATTCCTTTTTTGGGATAATGTCAAATGCTACTTATGATAGAAAAGATTCCACAACTGCATCTCAAAGCAGTCACACTAGTAGAGAAGAATTACCAACCAGAGTAATTCTTAGTTGTCCAGAGAAAGGTGAAAGTGCCAAAAAGCTCATTTTTTTGCCAAATTCCTTTGAAGAATTGCTACACATTGGAGCTAAAAAGTTTGATTTCTCTCCCACCAAAATTTTGACCAAAGAAGGAGCAGAAATTGAAGATTTATATGTTATAAGAGATGGTGATATTCTTATTCTTGCTTAG 2649 0.3817 MSSSSNCGRKTKMFGMCCDGDDDVHRRDTDEREIDKVEDVSQYSLNGILLPSLGVTTGRNGSRRPKLRRYVISPNNHRYRLWNKFLVILVFYTAWMCPFEFGFLERSKGAMSIIDNVVNGFFAIDIVLTFFVAYLDKSTYLLIDDHKLIALRYAKSWMIFDVIATIPYEVIRIIMPPSLQIYSYFNILRLWRLHRVSAMFARLEKDRNYSYFWVRCCKLTCVTLFSVHAAACFFYFLAARDNPETTWLGLVPAAIDQNLWGKYVVAIYWSIVTLVSVGYGDLHPVNTKEMVFDILYMLFNLGLTSYLIGNMTNLVVHWTERTKRYRFIDYIIVIENRDTVQSASNFAKRNHLPFRLKEQIFAHLLMKYRTDLEGLQQQEIIDSLPKAIQSSISHYLFYSLIDKVYLFHGVTNDLLFQMVTEMKAEYFPPKEDVILQNEAPTDFYIFITGAADLIIHKNGMEQVVGEVRPGDVVGETGVLCYRPQLFTVRTKRLSQILRLNRTVFINLTHSNVGDGTIIMNNFLQYLHQSGDPLMRGILAETEAMLARGKLDLPIISRGDDIFLHKLLKKGSDPNEVDTNGKTALHIAASKGNDHCVALLLEHGANPNITDLDGNVPIWEAMKGGHKSIMKLLVDNGADISFADVGYFSCMAIEQNNLELLKGIVQCGGDLTQPMNNRSTALHAAVCEGNVEIVKFLLSIGADIDKEDANGMSPRYLADHQGHQEILDIFQKVEHNKATHDIPAPSFIGRYQSEPTISTIPQVSKPPIQELTWFDNRHRRTVSPFHNSFFGIMSNATYDRKDSTTASQSSHTSREELPTRVILSCPEKGESAKKLIFLPNSFEELLHIGAKKFDFSPTKILTKEGAEIEDLYVIRDGDILILA 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr427g00007 882 PRINTS EAG/ELK/ERG potassium channel family signature 92 99 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr427g00007 882 PRINTS EAG/ELK/ERG potassium channel family signature 307 316 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr427g00007 882 PRINTS EAG/ELK/ERG potassium channel family signature 126 135 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr427g00007 882 PRINTS EAG/ELK/ERG potassium channel family signature 263 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr427g00007 882 PRINTS EAG/ELK/ERG potassium channel family signature 289 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr427g00007 882 PRINTS EAG/ELK/ERG potassium channel family signature 115 125 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr427g00007 882 PANTHER POTASSIUM CHANNEL AKT1 41 880 IPR045319 GO:0005249|GO:0006813
Mupr427g00007 882 FunFam Potassium channel KAT2 394 529 - -
Mupr427g00007 882 Pfam Ankyrin repeats (3 copies) 651 729 IPR002110 GO:0005515
Mupr427g00007 882 Pfam Ankyrin repeats (3 copies) 562 640 IPR002110 GO:0005515
Mupr427g00007 882 CDD CAP_ED 406 511 IPR000595 -
Mupr427g00007 882 Gene3D Jelly Rolls 374 530 IPR014710 -
Mupr427g00007 882 FunFam Potassium channel KAT3 81 317 - -
Mupr427g00007 882 ProSiteProfiles Ankyrin repeat profile. 579 611 IPR002110 GO:0005515
Mupr427g00007 882 Pfam Ion transport protein 80 322 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr427g00007 882 SUPERFAMILY Ankyrin repeat 563 733 IPR036770 -
Mupr427g00007 882 ProSiteProfiles Ankyrin repeat profile. 676 708 IPR002110 GO:0005515
Mupr427g00007 882 ProSiteProfiles cAMP/cGMP binding motif profile. 406 525 IPR000595 -
Mupr427g00007 882 Pfam Cyclic nucleotide-binding domain 426 510 IPR000595 -
Mupr427g00007 882 ProSiteProfiles Ankyrin repeat region circular profile. 579 610 - -
Mupr427g00007 882 Gene3D - 553 731 IPR036770 -
Mupr427g00007 882 ProSiteProfiles KHA domain profile. 819 882 IPR021789 -
Mupr427g00007 882 ProSiteProfiles Ankyrin repeat profile. 612 644 IPR002110 GO:0005515
Mupr427g00007 882 Pfam KHA, dimerisation domain of potassium ion channel 819 881 IPR021789 -
Mupr427g00007 882 SUPERFAMILY cAMP-binding domain-like 337 526 IPR018490 -
Mupr427g00007 882 SUPERFAMILY Voltage-gated potassium channels 74 316 - -
Mupr427g00007 882 SMART cnmp_10 406 523 IPR000595 -
Mupr427g00007 882 Gene3D - 82 316 - -
Mupr427g00007 882 ProSiteProfiles Ankyrin repeat region circular profile. 612 643 - -
Mupr427g00007 882 PRINTS Ankyrin repeat signature 580 595 IPR002110 GO:0005515
Mupr427g00007 882 PRINTS Ankyrin repeat signature 692 706 IPR002110 GO:0005515
Mupr427g00007 882 SMART ANK_2a 840 869 IPR002110 GO:0005515
Mupr427g00007 882 SMART ANK_2a 676 705 IPR002110 GO:0005515
Mupr427g00007 882 SMART ANK_2a 579 608 IPR002110 GO:0005515
Mupr427g00007 882 SMART ANK_2a 535 575 IPR002110 GO:0005515
Mupr427g00007 882 SMART ANK_2a 612 641 IPR002110 GO:0005515
Mupr427g00007 882 ProSiteProfiles Ankyrin repeat region circular profile. 676 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr427g00007 Mupr-Chr427 30657 37765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr427g00007 28 881 Ion Channels AT4G32500 56.401 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr427g00007 K21867 - gmx:100808832 1433.7