Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4277g00001 ATGGGCATCGAGGCAATGGAGTGGTGTTTAAGTTCTAAAACAAGAGAGGTTTTCCTTGGGGAAATGGCTGCCGAGGCCCGCTTGGATGGAGATATGACTTCAACTGAGATGACAGGATCAACAAGTGATCATCTACCAGTTCAAGGTCCTGAAAATACCCAAGAAATGGTTGGCAGGCAGCAGGATTCCAAGAATAACAAGGTGAAGGATGAAAGCAATAAAACAGTACCCTTTTACAAACTTTTCTCATTTGCAGACTCTTGGGATTGTCTTCTGATGCTTGTTGGGACAATAAGTGCTGTTGGTAATGGAATCTCTATCCCTTTAATGACTATACTTATTGGAGATGCGATTGATGCTTTCGGAGGACATGTTGATAATAAACAAGTAGTAGTTCATGAAGTTTCCAAGGTGTCTCTGAAGTTTGCATCCGTAGGTGCAGGTGCCTTTCTTGCAGCATTCTTGCTTACACATACATGCAATCTTCCAGAGGTGGCTTGCTGGGTGATCACTGGGGAGAGACAAGCTGCAAGAATAAGAGGCTTATACCTCAAAGCAATTTTGAGGCAAGATATCAGCTTCTTTGACAAGGAAACCAATACTGGAGAAGTTGTTGGAAGGATGTCAGGTGACACAGTTCTTATTCAAGAAGCCATGGGAGAGAAGGTAGGAAAATTCATACAGTATGTGGCATGTTTTTTAGGAGGTATAGTCATAGCATTCATCAAGGGTTGGCTTCTAACCCTTGTCCTTCTATCTTCTCTTCCACTTCTTGTCTTCTCTGGTTCCATAATGAGCTTTGCTTTTGCAAAGATGGCATCCCGAGGACAAGCAGCTTATTCTGAAGCAGCAACTGTAGTGCAGCGGACAATTGGTTCAATTCGAACTGTTGCATCATTTACGGGCGAGAAGCAAGCTATAGCTCAATACAATCAATACTTAACTAAAGCTTACAGAATTGGAGTGCAAGAGGGTGTGGTTAGTGGTTTTGGCTTTGGTTCAGTTCGTTTATTTATTTACTGCACTTATGGTTTGGCAGTATGGTTTGGAGGGAAGATGGTACTAGAGAAAGGTTATACAGGAGGAGAAGTCATTAGTGTATTTTTTGCAGTATTGACTGGTTCCATGTCTCTGGGGCAGGCATCTCCAAGCTTAACTGCATTTGCTGCAGGACAAGCTGCCGCCTTTAAAATGTTTGAAACAATAAAGAGGCAGCCAGATATTGATGCTTATGACACTTCTGGTCGACAGGTAGATGATATTTCTGGAGATATAGAACTTAGGGAGGTCTGCTTTAGTTATCCTTCAAGGCCTGATGAACAGATATTCAATGGATTTTCAATTTCAATATCAAGTGGCACTACTGCAGCTTTGGTAGGGAAAAGTGGGAGTGGGAAATCAACAGTGGTTAGTTTGATTGAGAGATTTTATGATCCACAAGCCGGTGAAGTTCTCATTGACGGCATCAACCTCAGAGAATTTCAGTTAAAATGGATCAGACAGAAAATAGGTCTTGTCAGCCAGGAACCTGTTCTCTTTACTTGCAGCATTAAAGAGAATATTGCCTATGGTAAGGATGGGGCAACAGATGAAGAAATCAGAGCTGCAGCTGAACTTGCTAATGCTGCTAATTTCATAGATAAATTTCCCCATGGACTTGACACAATGGTTGGAGAGCATGGAACTCAGCTCTCTGGAGGTCAAAAGCAAAGAATATCTATAGCAAGAGCAATTCTGAAGGACCCAAGAATTCTGCTCCTTGATGAAGCTACAAGTGCTCTTGATGCAGAGTCAGAGAGAGTGGTGCAAGAGACACTGGACAGAATTATGATAAACCGAACAACTGTCATTGTAGCCCATCGCCTAAGCACAATAAGGAATGCTGATATCATTGCAGTTATTCATCAAGGAAAAGTAATAGAAAAAGGCACACATGCTGAGCTCACTAAAGATCCTGATGGAGCTTTTAGCCAGCTCATTAGATTGCAAGAAATTAAAAGAGAGTCAGAACAGCATGGTGAAAATGACTCAGGCAGGTTAGAAAAAATTGTAGATTCCGAAAGACAATCAAGCCAACGTTTTTCTTTCCGTCAATCTTTGAGCCGGGGATCATCTTCAAGAGGAAACAGCAGTCGGCACTCATTCAGAATATCAAATGCTAAGCCTACTACACTTGATCTCTTGAAAGCATCAGAAGGAGGGTCTGAAGTTCTTCCTCCAGCAGTATCACATAAACCTCAAGAAGTTCCATTTCTCCGCATTGCTTATCTTAACAAGCCTGAAATCCCAGTGTTACTCATGGGGACTCTAGCAGCAGCAGTAACTGGGGCAATACTACCCACCGTGGGGCTTCTTCTCTCCCACGTGATAAATACTTTCTTTGAGCCTGCAGATGAACTCCGTAAAGACTCAAAGTTTTGGGCATTAATATTCGTTGCCCTTAGTGTGGCTGCCTTCATATTTATTCCATTAAGGTCCTACTTTTTTGCTGTAGCTGGTTCTAAGTTGATAAAAAGGATCCGACTAATGTGTTTTGAGAAAATAATTCACATGGAAATAGGCTGGTTTGATAAAGCTGAGAATTCAAGTGGAGCACTCGGAGCAAGGCTGTCAACTGATGCAGCTTCTATTCGAACTTTGGTTGGGGATGCTCTTGGTTTGCTTGTTCAAGATATTGCTACAGCAATTACAGCCTTGGTAATTGCCTTTGAGGCAAACTGGCAGCTTTCTCTCATCATTCTTGTTTTGGTACCTCTAGTATTACTAAATGGAAATGTGACAATGAAGTCCATGCAAGGATTCAACAAAGATGCAAAGAAACTATATGAGGAAGCAAGTCAAGTAGCGAATGATGCAGTAGGGAATATCAGAACAGTTGCTGCTTTCTGTGCAGAAGAGAAGGTGATGGAGTTATACCAGAAGAAATGTGTAGGACCAATCAACACAGGTATAAGGCAAGGTTTAGTCAGTGGAACAGGTTTCGGGCTATCACTCTTCTTTCTGTTCTCTGTTTATGCATGCAGTTTTTATGCCGGGGCTCGACTTGTTGAGAAGGGAAAAACATCAATCTCAGATGTTTTCCGTGTATTTTTTTCCCTCACAATGGCAGCTGTAGCAATGTCACAATCTGGCTTCATGACCCCAGCTGCAAGTAAAGCAAAAAGTTCTGCTGCTTCTGTATTTGCTATTCTTGATCAGAAATCAAGAATAGACCCCAGTGATGAGTCCGGAATGACATTGCAAGAAGTGAAGGGAGAGATTGAGTTCCACCATGTCACTTTCAAGTATCCAACCAGGCCGGATGTTCTTGTATTCAAAGATCTTTCCTTGATCATTCATGCAGGACAGACAGTTGCTCTAGTAGGAGAAAGTGGAAGTGGAAAGTCAACAGTGATCTCATTGTTACAAAGATTTTATGAGCCAGAATCAGGTCAGATTACAGTGGATGGAACAGAAATCCAAAAGCTACAACTTAAATGGTTTAGGCAGCAGATGGGATTGGTAAGCCAGGAGCCTGTGTTGTTTAATGACACCATCCGGGCCAATATTGCATATGGAAAAGGTGGTGATGCAACAGAAGCTGAAATTATAGCTGCAGCTGAACTGGCAAATGCCCACAAGTTCATTAGCAGTTTGCAGCAGGGTTATGATACAGTAGTGGGAGAGAGAGGGATTCAACTATCTGGAGGGCAGAAGCAGCGTGTGGCAATTGCAAGAGCCATAGTGAAGAGTCCAAAAATATTACTGCTAGATGAAGCCACCAGTGCACTTGATGCTGAGTCTGAAAGAGTGGTTCAGGATGCACTTGACCGAGTGAGGGTGGACAGAACCACAATTGTGGTGGCCCACAGGTTATCCACCATAAAGGATGCAGATTCAATTGCAGTGGTTAAAAATGGAATCATTGCTGAGAAAGGAAAGCATGACACTTTGCTTAACAAAGGTGATACCACTTGA 3957 0.4236 MGIEAMEWCLSSKTREVFLGEMAAEARLDGDMTSTEMTGSTSDHLPVQGPENTQEMVGRQQDSKNNKVKDESNKTVPFYKLFSFADSWDCLLMLVGTISAVGNGISIPLMTILIGDAIDAFGGHVDNKQVVVHEVSKVSLKFASVGAGAFLAAFLLTHTCNLPEVACWVITGERQAARIRGLYLKAILRQDISFFDKETNTGEVVGRMSGDTVLIQEAMGEKVGKFIQYVACFLGGIVIAFIKGWLLTLVLLSSLPLLVFSGSIMSFAFAKMASRGQAAYSEAATVVQRTIGSIRTVASFTGEKQAIAQYNQYLTKAYRIGVQEGVVSGFGFGSVRLFIYCTYGLAVWFGGKMVLEKGYTGGEVISVFFAVLTGSMSLGQASPSLTAFAAGQAAAFKMFETIKRQPDIDAYDTSGRQVDDISGDIELREVCFSYPSRPDEQIFNGFSISISSGTTAALVGKSGSGKSTVVSLIERFYDPQAGEVLIDGINLREFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAAELANAANFIDKFPHGLDTMVGEHGTQLSGGQKQRISIARAILKDPRILLLDEATSALDAESERVVQETLDRIMINRTTVIVAHRLSTIRNADIIAVIHQGKVIEKGTHAELTKDPDGAFSQLIRLQEIKRESEQHGENDSGRLEKIVDSERQSSQRFSFRQSLSRGSSSRGNSSRHSFRISNAKPTTLDLLKASEGGSEVLPPAVSHKPQEVPFLRIAYLNKPEIPVLLMGTLAAAVTGAILPTVGLLLSHVINTFFEPADELRKDSKFWALIFVALSVAAFIFIPLRSYFFAVAGSKLIKRIRLMCFEKIIHMEIGWFDKAENSSGALGARLSTDAASIRTLVGDALGLLVQDIATAITALVIAFEANWQLSLIILVLVPLVLLNGNVTMKSMQGFNKDAKKLYEEASQVANDAVGNIRTVAAFCAEEKVMELYQKKCVGPINTGIRQGLVSGTGFGLSLFFLFSVYACSFYAGARLVEKGKTSISDVFRVFFSLTMAAVAMSQSGFMTPAASKAKSSAASVFAILDQKSRIDPSDESGMTLQEVKGEIEFHHVTFKYPTRPDVLVFKDLSLIIHAGQTVALVGESGSGKSTVISLLQRFYEPESGQITVDGTEIQKLQLKWFRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISSLQQGYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDRVRVDRTTIVVAHRLSTIKDADSIAVVKNGIIAEKGKHDTLLNKGDTT 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4277g00001 1318 CDD ABC_6TM_Pgp_ABCB1_D2_like 755 1070 - -
Mupr4277g00001 1318 ProSitePatterns ABC transporters family signature. 564 578 IPR017871 GO:0005524|GO:0016887
Mupr4277g00001 1318 MobiDBLite consensus disorder prediction 666 715 - -
Mupr4277g00001 1318 CDD ABC_MTABC3_MDL1_MDL2 425 663 - -
Mupr4277g00001 1318 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 425 661 IPR003439 GO:0005524
Mupr4277g00001 1318 MobiDBLite consensus disorder prediction 689 715 - -
Mupr4277g00001 1318 PANTHER ABC TRANSPORTER B FAMILY 60 667 IPR039421 -
Mupr4277g00001 1318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 663 IPR027417 -
Mupr4277g00001 1318 Gene3D - 451 671 IPR027417 -
Mupr4277g00001 1318 FunFam ABC transporter B family member 1 1077 1318 - -
Mupr4277g00001 1318 FunFam ABC transporter B family member 9 80 421 - -
Mupr4277g00001 1318 CDD ABC_6TM_Pgp_ABCB1_D1_like 93 386 - -
Mupr4277g00001 1318 MobiDBLite consensus disorder prediction 33 61 - -
Mupr4277g00001 1318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1076 1316 IPR027417 -
Mupr4277g00001 1318 MobiDBLite consensus disorder prediction 33 70 - -
Mupr4277g00001 1318 Gene3D - 1077 1318 IPR027417 -
Mupr4277g00001 1318 Gene3D ABC transporter type 1, transmembrane domain 94 450 IPR036640 GO:0005524|GO:0016020
Mupr4277g00001 1318 FunFam ABC transporter B family member 1 415 664 - -
Mupr4277g00001 1318 MobiDBLite consensus disorder prediction 666 688 - -
Mupr4277g00001 1318 FunFam Uncharacterized protein 1051 1077 - -
Mupr4277g00001 1318 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 94 390 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4277g00001 1318 SUPERFAMILY ABC transporter transmembrane region 80 409 IPR036640 GO:0005524|GO:0016020
Mupr4277g00001 1318 Gene3D ABC transporter type 1, transmembrane domain 736 1075 IPR036640 GO:0005524|GO:0016020
Mupr4277g00001 1318 SUPERFAMILY ABC transporter transmembrane region 753 1071 IPR036640 GO:0005524|GO:0016020
Mupr4277g00001 1318 Pfam ABC transporter transmembrane region 765 1037 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4277g00001 1318 Pfam ABC transporter transmembrane region 93 376 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4277g00001 1318 Pfam ABC transporter 444 592 IPR003439 GO:0005524
Mupr4277g00001 1318 Pfam ABC transporter 1106 1255 IPR003439 GO:0005524
Mupr4277g00001 1318 CDD ABC_MTABC3_MDL1_MDL2 1087 1315 - -
Mupr4277g00001 1318 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 766 1052 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr4277g00001 1318 FunFam ABC transporter B family member 1 745 1050 - -
Mupr4277g00001 1318 ProSitePatterns ABC transporters family signature. 1227 1241 IPR017871 GO:0005524|GO:0016887
Mupr4277g00001 1318 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1087 1318 IPR003439 GO:0005524
Mupr4277g00001 1318 SMART AAA_5 1114 1307 IPR003593 GO:0016887
Mupr4277g00001 1318 SMART AAA_5 452 624 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4277g00001 Mupr-Chr4277 272 9331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4277g00001 168 663 Calmodulin-binding Proteins AT2G36910 40.681 2.80e-110 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4277g00001 K05658 - gmx:100777713 2086.23