Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4268g00013 ATGATTCTCTTATTGTTTGTGGTCATAATTAAGGCTTTGGATCTTGGGAGAGGCGCCAATCCCAAGGGATATATGGTAGAAGAAATATGGCAAGAGCTTGCAAAAGCAAAATACCTTGAGTGGGAGCTGTCATCGTCCAAACGATCATGGGATTTGCAGAGCTTGAAAGAAGCTTGTGAGTCTGCTCTGAAGGAAAAACATTTTCTGGATGCCGCCCAAACGGAAAGATTTGTAGATGATGCTACTACTTCCCAGTCGGAACAATTAGAGGCTTTAGAAAGAGTCTTCAATAAAGCCGCAGAGGCTGATACACCAACTGAGGTGCCAGATTACTTATGCTGCAGAATCACACTTGACATTTTCCATGATCCTGTAATCACTCCAAGTGGACTTACATATGAGAGAGCAGTGATTCTTGAACATCTTCATAAGGTGGGTAAATTCGATCCAATCACGCGGGAACCACTTGATCCATCACAGTTAGTACCAAACTTGGCCATTAAGGAAGCAGTCCAGGCATTCTTGGACAAACATGGGTGGGCCTACAAGTTTCCTTACGTCCTGACTTTTGAACATCCATCTTATTATGAAGTAGATGAATATGTTTGA 609 0.4253 MILLLFVVIIKALDLGRGANPKGYMVEEIWQELAKAKYLEWELSSSKRSWDLQSLKEACESALKEKHFLDAAQTERFVDDATTSQSEQLEALERVFNKAAEADTPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLHKVGKFDPITREPLDPSQLVPNLAIKEAVQAFLDKHGWAYKFPYVLTFEHPSYYEVDEYV 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4268g00013 202 CDD RING-Ubox_CHIP 108 178 IPR045202 -
Mupr4268g00013 202 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CHIP 11 183 IPR045200 GO:0000209|GO:0061630
Mupr4268g00013 202 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 184 IPR013083 -
Mupr4268g00013 202 Pfam U-box domain 108 180 IPR003613 GO:0004842|GO:0016567
Mupr4268g00013 202 SUPERFAMILY RING/U-box 102 182 - -
Mupr4268g00013 202 ProSiteProfiles U-box domain profile. 107 181 IPR003613 GO:0004842|GO:0016567
Mupr4268g00013 202 SMART Ubox_2 111 174 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4268g00013 Mupr-Chr4268 49742 51067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4268g00013 11 184 U-box Gene Family AT3G07370 70.690 1.01e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4268g00013 K09561 - gmx:100796519 330.872