LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr4268g00010	ATGTCATCTCCATCCTCAAATCCTCAGTGGATACACGATGTGTTCCTTAACTTCAGAGGAGAAGACACTCGTAAGACTCTGGTTTCCCATATCTACAACGCCCTCACGAACGCCGGAATCAACACTTTCATCGACGATCAGGAGCTTCCCAAGGGAACAGAGCTGGAGCCACAACTACTTCGAGCAATACGTGGCTCTCAGATTTCCATCGTCGTGCTCTCCAAATTCTATTGCCAATCTGCTTGGTGCCTTAATGAGCTTGAAGAAATCATGGAATGTCATAGAACCTATGGCCAGGTGGTTCTGCCTGTATTTTACGACGTTGATCCTTCAGATGTGCGTCATCAGAAGGGTTCTTTTGGGGAAGCTTTGGAAGCATTTCCACTAAAAAGCTACTCTGGGGAAGGGATGGAATATGTGTTGTCAACATGGAGGAGTGCCCTCACCCAAGCTGCAAATTTGTCTGGTTGGGATTTAAGGAATTATAGGAGTGAAGGTGACCTAGTGAAGGAAATTGTTAAGGAGGTTTTGAGAAAACTAGACAATGGGTTGTTGTCTATAACAGAATTTCCGATTGGATTGGAATCTCGTGCACAACAAGTGATTGGATTTATTGAAAATCAATCAAGCAAAGTTTGTGTTGTAGGGATATGGGGAATGGGAGGATCGGGTAAAACTACCATGGCCAAAGCTGTCTACAATCAAATTCATTACACTTTTGTGGATAGAAGTTTCATTGAAAATATTAGAGAGGTTTGTGAGAAGGATAGCAGAGGTCATATTCATTTACAGGAACAACTTCTTTCAGATGTCCTTAAAATGAAGATGAATATACATAGCATTGCGATGGGGAAAACTATGATTGAAAAAAGACTTTGTGGGAGAAGGTTACTTCTTGTACTTGATGATGTGAATGAGTTTGAGCAATTGAAGTCTCTGTGTGGAAACCGTAAATGGATTGGTCAAGGAAGTGTAATAATCATTACAACTAGAGATGTACGCCTGCTTAATGTACTTCAAGTTGACTATATCTATAAAATGGAGGAAATGGACAAAATTGAGTCTCTTGAGCTTTTTAGTTGGCATGCTTTCATGGATGCAACTCCAAGTGAAAACTTCGCTGAACTGTCAAGAAAAGTTGTTGCTTACTGTGGAGGATTACCACTGGCTCTTGAAGTCCTTGGCTCTTATTTATACCAGAGGACACAGAAAGAGTGGAAAAGTGTATTGTCAAAACTAGAAATAATTCCCAATGATCAAGTTCAAGAGAAATTAAGAATAAGCTTTGATGGTTTACACGATCAGATGGAAAAGAATATATTTCTTGACATATGTTGCTTCTTTATTGGTAAAGATAGAGCCTATGCTACGGAGATACTAAATGGTTGTGGATTGCATGCTGATATTGGAATATCAGTTCTTATAGAACGTAGCCTCATAAAAGTTGAAAAGAATAACAAACTTGGAGTGCATGATTTGCTACGAGACATGGGAAGAGAGATTATTCGAGAAAGTTCAGTAAGGGAACCTGGGAAGCGCAGTCGGTTGTGGTTTCATGAAGATGTAATTGATGTATTGACAAAGAATACTGGAACAGAAGCTATTGAGGGATTAACTCTGAAATTGCATTTAACCAGCAGAGATTGCTTCAATGCTGATGCTTTTGAGGAAATGAAGAGATTGAGACTGTTGCAACTTGATCATGTAAAACTCACTGGAGATTATGGGCATCTTTCGAAGCAGCTGAGGTGGATCTATTGGAAAGGATTTCCTTTAAAATGCATACCAAACAACTTTTATCTGGAAGATGTAATTGCAATTGAATTAAAATACAGTAATCTTATACTAGTCTGGAAAGAACCCCAGATGCTGGAGTGGCTAAAAGTCCTCAATCTTAGTCATTCCAAGTACTTGACAGAAACCCCTGACTTTTCAAAACTACCTAGTCTTGAAAAACTCATTCTCAAGGATTGTCCAAGTTTGCGCAAGGTACACAAATCCATTGGAGATCTCCACAATCTTCTTTTGATAAATTTGAAGGACTGTACAGGCCTAAGCAATCTCCCAAGAGAGACGTATAAGTTGAAATCTGTGAAAACTCTCATCCTATCTGGTTGTTCGAATATTGACAATTTGGAAGAAGATATAGTGCAGATGGAATCCTTGACAGTTCTAATTGCTGAAAATACTTCTGTGAAACAAGTTCCCTTTTCAATAGTAAGCTCAAAAAGCATTGGATATATATCCCTATGTGGATATGAAGGATTAGCATGTAATGCTTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAATGAATCCCCTGTCTCATATTCATCCATTTTGTGGCATATCATCTATGGTTTCTATGGATGTACAGAATAATAGTTTGGATGATCTTGCACCAATGCTTAGCAGCCTTTCAAATCTTCGGAGTGTTTTGGTTCTATGTGACACTGAGTTTCAACTATCTAAACAATTAAGAACTATTCTGGATGATGTATATGGTGTAAATTTTACTGAATTAGAATTATCATCATTTAGATCTCAAATTTCAAAGCATTCCTTGAGGTCTTATTTGATTGGAATTGGAAGTTACCAAGAAGTCTTCAATACTCTCAGCAAGAGCATATCTGAGGGATTGGCAATCAATGAGTCTGATGATGTTTTTCTCCCAGGTGACAATGATCCATATTGGTTGGCCCATATGGGTGAGGGACATTCAGTGTATTTCACTGTGCCTGAGGATTGTTGCATGAAGGGAATGGCTTTGTGTATAGTTTATTTATCAAACCCTGAAAACACAGCAACTGAATGTCTTATTAGTGTCTTAATGGTTAATTACACAAAGTGCACCATTCAGATATACAAGCGAGACACAATAATTTCCTTTAATGATGAAGATTGGCAGGGCATCATATCACATTTGGGATCTGGAGATGAGGTGGAGATTTTTGTGACTTTTGGGCATGGATTAGTTGTCAAGAAGACATCTGTCTATCTAATGTATGATAAATTAATTGACATGGAAATTGAGCCTTCTCCTCAGCCAAAGAAAGAGGCAAAGAAAGAGTTAGAGAAAGTGCCAAAGAAAGAATTAAAGGAAGTGCCAAAGAAAAAGGCAAAGAAAGAGTTAGAGAAAGTGCCAAAGGAAGAATTAAAGGAAGTGCCAAAGAAAGAGGCAAAGAAAGAGTTAGAGAAAGTGCCAAAGAAAAATGCCTTTGTGAGATTCATCAATAAAATTGTGGATGTATATAAGTTTCAGCAGATAGAGAGGTCAATCATTTGCATGAGAATGTTCTGTTACTTACATCCAACACAGATCTAA	3330	0.382	MSSPSSNPQWIHDVFLNFRGEDTRKTLVSHIYNALTNAGINTFIDDQELPKGTELEPQLLRAIRGSQISIVVLSKFYCQSAWCLNELEEIMECHRTYGQVVLPVFYDVDPSDVRHQKGSFGEALEAFPLKSYSGEGMEYVLSTWRSALTQAANLSGWDLRNYRSEGDLVKEIVKEVLRKLDNGLLSITEFPIGLESRAQQVIGFIENQSSKVCVVGIWGMGGSGKTTMAKAVYNQIHYTFVDRSFIENIREVCEKDSRGHIHLQEQLLSDVLKMKMNIHSIAMGKTMIEKRLCGRRLLLVLDDVNEFEQLKSLCGNRKWIGQGSVIIITTRDVRLLNVLQVDYIYKMEEMDKIESLELFSWHAFMDATPSENFAELSRKVVAYCGGLPLALEVLGSYLYQRTQKEWKSVLSKLEIIPNDQVQEKLRISFDGLHDQMEKNIFLDICCFFIGKDRAYATEILNGCGLHADIGISVLIERSLIKVEKNNKLGVHDLLRDMGREIIRESSVREPGKRSRLWFHEDVIDVLTKNTGTEAIEGLTLKLHLTSRDCFNADAFEEMKRLRLLQLDHVKLTGDYGHLSKQLRWIYWKGFPLKCIPNNFYLEDVIAIELKYSNLILVWKEPQMLEWLKVLNLSHSKYLTETPDFSKLPSLEKLILKDCPSLRKVHKSIGDLHNLLLINLKDCTGLSNLPRETYKLKSVKTLILSGCSNIDNLEEDIVQMESLTVLIAENTSVKQVPFSIVSSKSIGYISLCGYEGLACNAFPSIIWSWMSPTMNPLSHIHPFCGISSMVSMDVQNNSLDDLAPMLSSLSNLRSVLVLCDTEFQLSKQLRTILDDVYGVNFTELELSSFRSQISKHSLRSYLIGIGSYQEVFNTLSKSISEGLAINESDDVFLPGDNDPYWLAHMGEGHSVYFTVPEDCCMKGMALCIVYLSNPENTATECLISVLMVNYTKCTIQIYKRDTIISFNDEDWQGIISHLGSGDEVEIFVTFGHGLVVKKTSVYLMYDKLIDMEIEPSPQPKKEAKKELEKVPKKELKEVPKKKAKKELEKVPKEELKEVPKKEAKKELEKVPKKNAFVRFINKIVDVYKFQQIERSIICMRMFCYLHPTQI	1109

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr4268g00010	1109	Gene3D	Ribonuclease Inhibitor	549	861	IPR032675	-
	Mupr4268g00010	1109	Gene3D	-	9	180	IPR035897	-
	Mupr4268g00010	1109	Pfam	NB-ARC domain	198	414	IPR002182	GO:0043531
	Mupr4268g00010	1109	Pfam	TIR domain	12	184	IPR000157	GO:0007165
	Mupr4268g00010	1109	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	12	721	IPR044974	GO:0006952
	Mupr4268g00010	1109	SUPERFAMILY	Toll/Interleukin receptor TIR domain	2	157	IPR035897	-
	Mupr4268g00010	1109	FunFam	Disease resistance protein (TIR-NBS-LRR class)	8	182	-	-
	Mupr4268g00010	1109	PRINTS	Disease resistance protein signature	384	398	-	-
	Mupr4268g00010	1109	PRINTS	Disease resistance protein signature	214	229	-	-
	Mupr4268g00010	1109	PRINTS	Disease resistance protein signature	693	709	-	-
	Mupr4268g00010	1109	PRINTS	Disease resistance protein signature	291	305	-	-
	Mupr4268g00010	1109	Gene3D	-	350	433	IPR042197	-
	Mupr4268g00010	1109	SUPERFAMILY	L domain-like	490	815	-	-
	Mupr4268g00010	1109	SMART	till_3	11	154	IPR000157	GO:0007165
	Mupr4268g00010	1109	Gene3D	-	181	344	IPR027417	-
	Mupr4268g00010	1109	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	183	444	IPR027417	-
	Mupr4268g00010	1109	ProSiteProfiles	TIR domain profile.	10	180	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr4268g00010	Mupr-Chr4268	35470	41344	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr4268g00010	12	739	WRKY Transcription Factor Family	AT4G12020	29.183	1.70e-80	288

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr4268g00010	-		-	gmx:100815297	1535.78