Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4266g00001 ATGGAACCTGTTCAATTGATTTCTGAAGAATGGGGTTCTCTTTGTGGATTGCACACGACTGAAGAAGCTGATTTCATGGCTCAGTTGTTTGGTGGTAACTATTTTGTCACAGAAAAGCACTGTGGAATTACTAGTTTTGGCACTAATAGCAACTCATACTTTCCTTCAAATGTTACAGATACTAATCTTTTATGTTTCTCACAAGGGAGTAGCTCTAGCACTGATAGTGGTAACAACATCTTTTCCACTACAAGTAGTGGAACCTACTCCTGTGATCCAGCAAAAAACTTTGATTCTGTGTCCATGGTTTTTTGCCTGGGAGATGCCAAATTTAGTCCTCATAGTTTTCAATGGAATGACAACTTAAGCCAACAGACAAATGAAAACACTGATGAAGAGTCAAGTCTAGACCCAGTGGCTCTTGCTGACAACAATTTGCAGACTAAGAGGGAGTATGAAATGATCGCTTCTGAACCTGTAGAAGAGGATAGAAGCAGAAACCTGGAGAACCAAGCAAAAAGACTTAGGAGCTCAATAGAGGTCTCAAAAACATTGAGGAATGCTAAATTGAAGAAAAATCCAAAATCTACTTCAATGAGCAATAATGAAGATGATAGAAGCTTGAGCCTCCAAAGGCATAGCTGTTTCTCACATGGTGACTCTAATGCTTCTCTGGAAGGGGCATCAAAAGATCCTGCACCTTCCAATTTGAATAGAAAATCAAGAGCAAATACTGCTCCTGCCACTGATCCACAGAGCCTTTATGCAAGAAAGAGAAGAGAAAGAATAAATGAAAGGTTGAGAATACTGCAAAATCTTGTCCCTAACGGAACTAAGGTGGATATCAGTACCATGCTTGAGGAAGCTGTTCAATACGTGAAATTTTTACAGCTCCAAATTAAGCTTCTGAGTTCTGACGATCTGTGGATGTATGCTCCAATTGCTTTCAATGGAATAAACATCGGATTAGACCTCTGTTTCTCCAACCAAAGGAAGATGAATTAA 1005 0.394 MEPVQLISEEWGSLCGLHTTEEADFMAQLFGGNYFVTEKHCGITSFGTNSNSYFPSNVTDTNLLCFSQGSSSSTDSGNNIFSTTSSGTYSCDPAKNFDSVSMVFCLGDAKFSPHSFQWNDNLSQQTNENTDEESSLDPVALADNNLQTKREYEMIASEPVEEDRSRNLENQAKRLRSSIEVSKTLRNAKLKKNPKSTSMSNNEDDRSLSLQRHSCFSHGDSNASLEGASKDPAPSNLNRKSRANTAPATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAFNGINIGLDLCFSNQRKMN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4266g00001 334 MobiDBLite consensus disorder prediction 155 258 - -
Mupr4266g00001 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 252 313 IPR036638 GO:0046983
Mupr4266g00001 334 CDD bHLH_AtIND_like 248 310 - -
Mupr4266g00001 334 SMART finulus 253 302 IPR011598 GO:0046983
Mupr4266g00001 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 247 296 IPR011598 GO:0046983
Mupr4266g00001 334 MobiDBLite consensus disorder prediction 120 139 - -
Mupr4266g00001 334 MobiDBLite consensus disorder prediction 120 134 - -
Mupr4266g00001 334 FunFam Basic helix-loop-helix transcription factor 248 305 - -
Mupr4266g00001 334 MobiDBLite consensus disorder prediction 155 173 - -
Mupr4266g00001 334 Pfam Helix-loop-helix DNA-binding domain 257 297 IPR011598 GO:0046983
Mupr4266g00001 334 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 105 305 IPR045843 GO:0003700|GO:0006355
Mupr4266g00001 334 MobiDBLite consensus disorder prediction 212 251 - -
Mupr4266g00001 334 Gene3D - 250 305 IPR036638 GO:0046983
Mupr4266g00001 334 MobiDBLite consensus disorder prediction 191 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4266g00001 Mupr-Chr4266 8451 10006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4266g00001 10 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 40.113 5.99e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr4266g00001 HLH 1.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4266g00001 - - gmx:100816788 499.59