Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4264g00002 TTCTCTCTCTCACCACTTTCCAACGTTCTCTTTTTGTCTCGCGATTCGCAATTTTCCCCAATCTTACGCCTAGGGTTTCTATCGCAAACCCTCCCTCTCTCCGACGAGGTCGCGTGCAAAGGGATTTCAAAGCTTCGGAAGAAAAAAATGAGGCCTGTCTTCTGCGGAAACCTGGATTTCGACGCGCGTCAATCCGATGTCGAGAGACTCTTCAGAAGATACGGCAAGGTTGATAGAGTTGACATGAAATCCGGGTTTGCTTTCGTCTACATGGAAGATGAACGTGATGCTGAGTATGCAATCAGAAGGCTTGATAGAACAGAATTTGGTAGAAAGGGACGCCGGATTCGTGTTGAGTGGACTAAGCAAGAACGCGACAGTAGAAAGTCAGGCAGTGATTCCAGAAAATCTTCATCTAATTCAAGACCATCCAAGACTTTGTTTGTTATAAATTTTGATCCAGTTCACGCCAGGACAAGGGATCTTGAGAGACATTTTGATTCCTATGGGAAAATATTAAATATAAGGATCAGAAGGAATTTTGCTTTTATTCAGTATGAATCCCAGGAGGATGCTACTAGAGCTTTGGAAGCGACCAACCTGAGCAAGTTTATGGACCGTGTTATCACAGTGGAGTATGCCATAAGAGATGATGATGACAGAGACAGAAGGAATGGATACAGTCCTGATAGAAGAGGTCATGACTCTCCTGATGGGAGATATGGTCGTGGCAGATCCCCCAGTCCATATCGTAGAGGTAGGGGTAGCCCAGATTATGGTCATGGATCAAATCCATCTTCCAGACCAGAAGCAAGAGGAAGCCCCAAGTATGAACGAGCTGAAAGCCCGATAAATGGGAGATATGATAGCCGGTCTCCCCCACCTAGAGATAAGTCGCGATCGCGATCCTGA 912 0.4572 FSLSPLSNVLFLSRDSQFSPILRLGFLSQTLPLSDEVACKGISKLRKKKMRPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRKSGSDSRKSSSNSRPSKTLFVINFDPVHARTRDLERHFDSYGKILNIRIRRNFAFIQYESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYSPDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPSSRPEARGSPKYERAESPINGRYDSRSPPPRDKSRSRS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4264g00002 303 Gene3D - 42 134 IPR012677 -
Mupr4264g00002 303 Gene3D - 135 227 IPR012677 -
Mupr4264g00002 303 MobiDBLite consensus disorder prediction 219 241 - -
Mupr4264g00002 303 SMART rrm1_1 52 119 IPR000504 GO:0003723
Mupr4264g00002 303 SMART rrm1_1 146 212 IPR000504 GO:0003723
Mupr4264g00002 303 MobiDBLite consensus disorder prediction 121 135 - -
Mupr4264g00002 303 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 156 296 - -
Mupr4264g00002 303 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 51 123 IPR000504 GO:0003723
Mupr4264g00002 303 MobiDBLite consensus disorder prediction 219 303 - -
Mupr4264g00002 303 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 53 112 IPR000504 GO:0003723
Mupr4264g00002 303 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 147 209 IPR000504 GO:0003723
Mupr4264g00002 303 MobiDBLite consensus disorder prediction 121 143 - -
Mupr4264g00002 303 MobiDBLite consensus disorder prediction 272 303 - -
Mupr4264g00002 303 FunFam Serine/arginine-rich splicing factor RS31 50 134 - -
Mupr4264g00002 303 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 145 216 IPR000504 GO:0003723
Mupr4264g00002 303 FunFam Serine/arginine-rich splicing factor RS31 137 229 - -
Mupr4264g00002 303 SUPERFAMILY RNA-binding domain, RBD 51 220 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4264g00002 Mupr-Chr4264 25477 28728 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4264g00002 53 211 Eukaryotic Initiation Factors Gene Family AT4G34110 24.138 5.29e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4264g00002 K12893 - gmx:100815452 418.698