Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4264g00001 ATGGGTTATGGTACCAATTTGGTGACCACTGTCATTGGGTTTGGGTTGAGTGCAACTTTCATTGTATTTGTTTGCACAAGAATAATTTGTGGAAGATTACGAGAGCGCCTGGGATCACGGACTATTCATGAAATTGAATCAAGAACAGATATAGAACGGCCAGAACATCGTCCTATTGACCCTGAACCTGCTTTTCTTGCTGCAATCCCCACTTTGAATTTCAACCAAGAAGCCTTCAGTTCCTTTGAAAGTACACAGTGTGTGATATGTTTGGCAGAGTACAAAGAAAAAGAAGTATTGCGTATGATACCTAAATGTGGGCACACTTTTCACCTTTCTTGCATTGATATGTGGCTGAGAAAACAGTCAACATGTCCAGTGTGCCGTTTGTCACTGCAGAATGCTTCTGAAACAAAACATGTGAGACATGTAACATTTACCATCAGGCAATCTCTTGATGAGTCCAATACTTCAGAAAGGAACACAGATAATGAGAGAAGTTGA 504 0.4048 MGYGTNLVTTVIGFGLSATFIVFVCTRIICGRLRERLGSRTIHEIESRTDIERPEHRPIDPEPAFLAAIPTLNFNQEAFSSFESTQCVICLAEYKEKEVLRMIPKCGHTFHLSCIDMWLRKQSTCPVCRLSLQNASETKHVRHVTFTIRQSLDESNTSERNTDNERS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4264g00001 167 CDD RING-H2_EL5-like 86 129 - -
Mupr4264g00001 167 Pfam Ring finger domain 86 129 IPR001841 -
Mupr4264g00001 167 PANTHER OS11G0150450 PROTEIN 2 162 - -
Mupr4264g00001 167 SMART ring_2 87 128 IPR001841 -
Mupr4264g00001 167 SUPERFAMILY RING/U-box 79 138 - -
Mupr4264g00001 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 139 IPR013083 -
Mupr4264g00001 167 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4264g00001 Mupr-Chr4264 4770 6021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4264g00001 76 162 C3H Transcription Factor Family AT4G10160 41.379 9.67e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4264g00001 - - gmx:100810553 281.567