Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4263g00001 GAAACCAACGAAAGAAACAGAGCACAATACAAGGAAATCCTGCGATTTCGAAGTAGAAGAAGGACAAGAACAAAAAACGTTGGTATTCAGCATCCATATGCATACCAACAAGACACGCTTTTTTGCTCAATCTCCATAGCGGGGGATGTAGCATGCCATAAAAGTAAGAGCTCCGGTTCCACGTCATCTGGAAAGAAATACTGTAGATCTGGGTTAGCAATGGCTCCTGGAAGCAGTGTTTTCAAAGAAGTTCTTGAATCTCATCTGATGTCTTCAGATTATGAAACAGGCAAGGCTAAATCTGAGGCCAAGAGTAACAGTACATCTACAAAATCTAGTGTTGGCTTGAGTGGAAAGAACGGAATTAGTTCAAATAATGGCGTGTACGAATTACTTGGATGCCCTGTTTGCAACAATTTAATGTATCCCCCAATTCACCAGTGCCCAAATGGCCATACGTTATGTTCCAATTGTAAAATTGAAGTCCATAATATCTGCCCATCCTGTCATCATGATCTCGGGAATATAAGGTGTTTGGCTTTGGAGAAAGTGGCAGAATCATTGGAGCTTCCTTGCAGATATCAGAGTCTAGGTTGTCATGATATATTCCCCTACTACACTAAGCTCAAGCATGAGCAAAATTGTGGATTTCGTCCATATAATTGCCCCTATGCTGGATCTGAGTGCTCTGTGATGGGTGACATTCCGACTCTTGTTGCCCATCTCAAGGATGATCACAAGGTTGACATGCATGATGGATGCACCTTCAATCATCGATATGTCAAAGCAAATCCACATGAAGTTGAAAATGCCACATGGATGCTAACTATTTTTAATAGTTTTGGAAGGCATTTCTGCTTGCACTTTGAGGCGTTTCAGCTTGGATCAGCTCCAGTATATATGGCATTTTTACGATTTATGGGTGATGACAATGAAGCAAAGAAGTTCAGCTACAGCTTGGAAGTTGGTGCAAATGGTCGCAAACTTATATGGCAAGGAATTCCAAGGAGCATTCGAGACAGTCATAGAAAAGTTCGAGATAGTCAAGATGGACTTATAATTCAGAGGAATCTAGCCCTTTATTTTTCTGGTGGAGAAAGACAGGAGTTGAAGTTGAGAATCACTGGTCGTATTTGGAGAGAAGATTGA 1149 0.4117 ETNERNRAQYKEILRFRSRRRTRTKNVGIQHPYAYQQDTLFCSISIAGDVACHKSKSSGSTSSGKKYCRSGLAMAPGSSVFKEVLESHLMSSDYETGKAKSEAKSNSTSTKSSVGLSGKNGISSNNGVYELLGCPVCNNLMYPPIHQCPNGHTLCSNCKIEVHNICPSCHHDLGNIRCLALEKVAESLELPCRYQSLGCHDIFPYYTKLKHEQNCGFRPYNCPYAGSECSVMGDIPTLVAHLKDDHKVDMHDGCTFNHRYVKANPHEVENATWMLTIFNSFGRHFCLHFEAFQLGSAPVYMAFLRFMGDDNEAKKFSYSLEVGANGRKLIWQGIPRSIRDSHRKVRDSQDGLIIQRNLALYFSGGERQELKLRITGRIWRED 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4263g00001 382 ProSiteProfiles Zinc finger SIAH-type profile. 187 247 IPR013010 GO:0008270
Mupr4263g00001 382 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 100 380 - -
Mupr4263g00001 382 MobiDBLite consensus disorder prediction 101 117 - -
Mupr4263g00001 382 SUPERFAMILY TRAF domain-like 187 379 - -
Mupr4263g00001 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 241 IPR013083 -
Mupr4263g00001 382 CDD RING-HC_SIAHs 132 170 - -
Mupr4263g00001 382 FunFam E3 ubiquitin-protein ligase SINAT5-like 86 185 - -
Mupr4263g00001 382 ProSiteProfiles Zinc finger RING-type profile. 134 170 IPR001841 -
Mupr4263g00001 382 Pfam Seven in absentia protein family 176 375 IPR018121 GO:0005737|GO:0006511|GO:0007275
Mupr4263g00001 382 FunFam E3 ubiquitin-protein ligase SINAT3 186 242 - -
Mupr4263g00001 382 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 242 375 IPR008974 GO:0005515
Mupr4263g00001 382 MobiDBLite consensus disorder prediction 96 117 - -
Mupr4263g00001 382 SUPERFAMILY RING/U-box 126 176 - -
Mupr4263g00001 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 186 IPR013083 -
Mupr4263g00001 382 FunFam E3 ubiquitin-protein ligase SINAT5-like 243 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4263g00001 Mupr-Chr4263 518 4948 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4263g00001 74 382 C3H Transcription Factor Family AT2G41980 79.288 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4263g00001 K04506 - gmx:100813966 645.966