Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4262g00003 ATGATTAATGGTGGCAAAGTGCAATATTGGTGTTGCCTCAATCTGTCAGGAAGAACGCAAAGAGATTTGATATTTCAATTTTGCCATCAGTTGGCTGAAATGTGTAACAGCAAGGGAATGCACTTTAATCCAGAGCCTTTAGTGCCTCCAATTGCTGGTCAACCTAATCGAATAGAGGATGCCCTTGTGAACGTTCAAAAGCAGTGTACGACCAAACTAGCAGACATGAAGGTGGGGGGTAGATTGCAGTTATTGGTAATAATTTTGCCTGATGTCAGGGGGCAATATGGAAAAATAAAGCGTATATGTGAAACTGAACTAGGAATAGTTTCTCAGTGTTGTCAGCCGAGGCAAGTTTATAAGTTGAACAAGCAATATCTTGAAAATGTGGCCCTGAAGATAAATGTGAAGGTTGGTGGTTCCAACACAGTATTGAATGATGCATTTGCAAGAAAAATCCCTCATGTCTCTGATAAAGCAACAATAATCTTAGGTGCGGATGTAACACATCCACAACCAGGGGAAGACTCTACTCCTTCTATTGCTGCAGTGGTGGCATCCATGGATTGGCCTTATGTCACAAGGTACAGAGGAGTTGTTTCTGCTCAGGTGTCCCGTGAAGAAATCATTCAAGATCTTTATAAGACATATCATGATCCTATGAAGGGGACTACTGTGCATTCGGGTATCATCAGGGAATTATTTCGTTCTTTCCGTTTGTCAACTGGGCGCAGGCCAGACCGGATTATATTCTACAGAGATGGAGTTAGTGAGGGCCAATTTAGTCAGGTTTTGCTTTATGAGATGGATGCAATAAGAAAGGATGGGGGCATATTTTATAACAACCACACCGATAGTAAAATAAAACACAACATGAATCCCTCTATGCTCGCATGCTTTGTGGATAATAAACTTAATTATGCTTGTGCCTCACTACAGGAGGGCTATTTACCCCCTGTTACTTTTGTTGTAGTCCAGAAAAGACATCACACTCGCTTCTTCCCTCGTGATCATGGAAGTCGCGATCAGACAGATAAAAGTGGAAATATAATGCCAGGGACGGTTGTAGACACAACCATTTGCCACCCTCGGGAGTTTGATTTTTACCTCAACAGTCATGCTGGGATTCAAGGAACTAGTCGACCAACTCATTATCATGTATTGTACGATGAAAATAACTTCACCGCTGACGAGTTGCAAATTTTTACAAATAATTTATGTTACACGTATGCAAGGTGTACCCGATCAGTTTCAATAGTTCCTCCCGCGTATTATGCGCACTTGGCCGCATTTCGTGCACGCTACTACATTGAAGGTGAAATATCTGATGCTGGTTCTACAAGTGGAAACAGGTCTACAAACTTTGAGGTGGTATTGCCCTCAGTTAAGGAGAATGTGAAAGAC 1404 0.4188 MINGGKVQYWCCLNLSGRTQRDLIFQFCHQLAEMCNSKGMHFNPEPLVPPIAGQPNRIEDALVNVQKQCTTKLADMKVGGRLQLLVIILPDVRGQYGKIKRICETELGIVSQCCQPRQVYKLNKQYLENVALKINVKVGGSNTVLNDAFARKIPHVSDKATIILGADVTHPQPGEDSTPSIAAVVASMDWPYVTRYRGVVSAQVSREEIIQDLYKTYHDPMKGTTVHSGIIRELFRSFRLSTGRRPDRIIFYRDGVSEGQFSQVLLYEMDAIRKDGGIFYNNHTDSKIKHNMNPSMLACFVDNKLNYACASLQEGYLPPVTFVVVQKRHHTRFFPRDHGSRDQTDKSGNIMPGTVVDTTICHPREFDFYLNSHAGIQGTSRPTHYHVLYDENNFTADELQIFTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGEISDAGSTSGNRSTNFEVVLPSVKENVKD 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4262g00003 468 Gene3D - 152 468 IPR036397 GO:0003676
Mupr4262g00003 468 ProSiteProfiles Piwi domain profile. 84 438 IPR003165 GO:0003676
Mupr4262g00003 468 SUPERFAMILY Ribonuclease H-like 18 438 IPR012337 -
Mupr4262g00003 468 SMART Piwi_a_2 84 438 IPR003165 GO:0003676
Mupr4262g00003 468 CDD Piwi_ago-like 1 437 IPR045246 -
Mupr4262g00003 468 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 439 - -
Mupr4262g00003 468 Gene3D - 1 150 - -
Mupr4262g00003 468 Pfam Piwi domain 304 437 IPR003165 GO:0003676
Mupr4262g00003 468 Pfam Piwi domain 85 300 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4262g00003 Mupr-Chr4262 31364 33677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4262g00003 1 467 Eukaryotic Initiation Factors Gene Family AT1G48410 59.711 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4262g00003 K11593 - pop:7472995 650.203