Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4262g00002 TTAAATGTTGGAGTTCCTACTTATTTATGTGGTAGGAGAGTATCGTTCACTCCTGAGATCATCTCGAAAAAGGTGTCCAGAGATGTTATCAGTTTGCTGGTCCAAGCGCACCGAGAATCGGCGCTGGGAAATCGCTTACCGGCCTTCGATGGACGAAAGAGTCTTTTCACTGCAGGACCTTTTCCTTTTGAATCGAAGGAATTTGTGATCAAGTTAGTTGACGATGACAATAGGCAAGGCTCGTCTTCTGCTAGAAGAAGGCGCGACCGTGAGTATAGGGTGACAATCCGGTATGCTAACAAGACTGACCTTCATCACCTTTTTGAGTTTCTCAGCCGCCGTCAGCTGGACTGTCCTCAAGAAACTATTCAAGCTCTTGATGTTGTTCTGCGGGCAACGCCATCTCAACATTATAATGTTGTGGGGAGGTCGTTTTTCTCGCCTGTTTTGGGGCAAACTGGCTCACTTGGTAGTGGTACAGAGTATTGGCGGGGATATTACCAGAGCCTTCGCCCAACTCAGATGGGGCTTTCTCTCAATATTGATGTCTCAGCCAGGGCATTTTATGAACCGATTCCTGTGATTGAATTCATTGAGAAACATTTTAATTTGAATCCTACTAGACCTTTTTCTGATCACGATCGTGTCAAGGTTAAGAAAGCTTTGAGAGGAGTCAAGGTAGAAGTTACTCATGGACAGAATCTTAGACGTTACAAAGTTACTGGACTCACAACAGAACCTCTCAGACAGTTAACGTTTACTGTCGATGACAATAGTACAAAAATGTCAGTTGTCCAATATTTTCGTGAGAAATACAATATTTCGTTAAAGTTTTCTGCCCTTCCTGCTCTCCAAGCTGGTAGTGACTCTAAACCAATTTATCTGCCTATGGAGGTTTATCTCTGCACTACTCTCCCTCTTTGTCAAATTATGGCTGGACAGAGATACACAAAGAAATTGAATGAGGATCAAGTAACTGCTCTTTTAAGGGCAACATGTCAGCGTCCTCGTGACAGAGAAAACAACATTAGACAGGTTGTGAGGCAGTCCAATTTCAGCACAGACAAGTTTGTGCGTACTTTTGGAATTAAAGTGAAGGAGGAACTGACATTGATTGAAGCTCGAGTTTTGCCGCCTCCGATGCTTAAATATCATGAAACAGGCAAAGAATCACATGTTGAACCATGGATGGGTCAGTGGAATATGATTAATAAGTGTTTTATCTCAATTTGTTCTGTGTTTATAATTAATTTCCAGAGTAAAGAATTAATCCCTTGTGATATGTTG 1287 0.4211 LNVGVPTYLCGRRVSFTPEIISKKVSRDVISLLVQAHRESALGNRLPAFDGRKSLFTAGPFPFESKEFVIKLVDDDNRQGSSSARRRRDREYRVTIRYANKTDLHHLFEFLSRRQLDCPQETIQALDVVLRATPSQHYNVVGRSFFSPVLGQTGSLGSGTEYWRGYYQSLRPTQMGLSLNIDVSARAFYEPIPVIEFIEKHFNLNPTRPFSDHDRVKVKKALRGVKVEVTHGQNLRRYKVTGLTTEPLRQLTFTVDDNSTKMSVVQYFREKYNISLKFSALPALQAGSDSKPIYLPMEVYLCTTLPLCQIMAGQRYTKKLNEDQVTALLRATCQRPRDRENNIRQVVRQSNFSTDKFVRTFGIKVKEELTLIEARVLPPPMLKYHETGKESHVEPWMGQWNMINKCFISICSVFIINFQSKELIPCDML 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4262g00002 429 CDD PAZ_argonaute_like 191 299 - -
Mupr4262g00002 429 SMART PAZ_2_a_3 196 323 IPR003100 GO:0005515
Mupr4262g00002 429 SUPERFAMILY PAZ domain 187 352 IPR036085 GO:0005515
Mupr4262g00002 429 Pfam N-terminal domain of argonaute 23 130 IPR032474 -
Mupr4262g00002 429 Pfam Argonaute linker 1 domain 141 190 IPR014811 -
Mupr4262g00002 429 Pfam Argonaute linker 2 domain 338 384 IPR032472 -
Mupr4262g00002 429 SMART DUF1785_2 139 191 IPR014811 -
Mupr4262g00002 429 Pfam PAZ domain 198 328 IPR003100 GO:0005515
Mupr4262g00002 429 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 27 421 - -
Mupr4262g00002 429 Gene3D paz domain 186 316 - -
Mupr4262g00002 429 ProSiteProfiles PAZ domain profile. 192 306 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4262g00002 Mupr-Chr4262 28826 31357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4262g00002 14 418 Eukaryotic Initiation Factors Gene Family AT1G48410 52.670 1.10e-142 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4262g00002 K11593 - gmx:100805246 579.711