Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4261g00004 ATGGGTACGGCAACAAAATATATGCATAGGAACATGGACATCGATTCCAACGAGGAGGCTGCGGAGCCACCTCAGGCTTCAGTAGCTGGTTCTTTACTAGAAGAACTAGCATCTCTCCGCCAACACTTGCAGGACCGTATTAGGCACCTTGATGAAATAACTCGAAGAGCGACGGAGCGCGAGAGAGGGACACCCCCACCGGTTGACTCTACGATCGAATTAAGCAAGTTGACAGTGACGGCTAATCCTGCAGATGAAGGAACGAAGCGCCGGGAAACTGGGAAAGGGAGCAAAACGAAAGGTGCGGAATTGGTAGCTGAAGCATTGGGGAAGATGGATACAGGTGGCAGCAGCAGTAAGAAGAAAGGAGGAGGCAGTGGCGATGGAAGTCAAAACTTTTTTGATTGCAATATATGCTTGGAGATGGCAAAAGAACCTGTAGTGACCTGCTGCGGTCACTTGTTTTGTAGAGCATGCTTTGATGGTTTGGAATGTGAGTATTCAAACGCAAGGGTGTGTCCTGTTTGTGAAGGAGAGGTCATAGAGAGTGGCATTACTCCGATTTATGGCAAAGGCAATGTCAGTGGCACTAGTGATTCGAGAGGTCCTCCTCCACCTCCTGCGCACAGAGTTGAAACTTTTAGGCGGCAGTTAGTGGGTATGGGAGAACCTTCTGCTACAACTCGAAGTCTCCAGCGGTTGGAAAACTTTACTGCTATGTTAGCAGACCGACTTCAGGCAGAATCACAAACCCTCAATACGGCTCCATCTCCCATTTCTTGGTTGATGTCGCAAGGAGCTTTTTCATCCCTTTTATCATCATTGAATTCTGCCACAAATTCAACTGAAACATTGCTTGTTGACCTTTATTCATACATTCAACATAACCGTATAGAGGAGGATGATTCCGAATCCGATTCCGATTCCGATTCTGAATCTGAATCTGAATCCGACTCCCAATCCCGATCCCAATCCCAATCCCAATCCCAATCCGCCGACAGTTAA 1005 0.4746 MGTATKYMHRNMDIDSNEEAAEPPQASVAGSLLEELASLRQHLQDRIRHLDEITRRATERERGTPPPVDSTIELSKLTVTANPADEGTKRRETGKGSKTKGAELVAEALGKMDTGGSSSKKKGGGSGDGSQNFFDCNICLEMAKEPVVTCCGHLFCRACFDGLECEYSNARVCPVCEGEVIESGITPIYGKGNVSGTSDSRGPPPPPAHRVETFRRQLVGMGEPSATTRSLQRLENFTAMLADRLQAESQTLNTAPSPISWLMSQGAFSSLLSSLNSATNSTETLLVDLYSYIQHNRIEEDDSESDSDSDSESESESDSQSRSQSQSQSQSADS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4261g00004 334 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 107 326 IPR045103 GO:0005783|GO:0006511|GO:0061630
Mupr4261g00004 334 Pfam Prokaryotic RING finger family 4 136 181 - -
Mupr4261g00004 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 197 IPR013083 -
Mupr4261g00004 334 SMART ring_2 136 176 IPR001841 -
Mupr4261g00004 334 Coils Coil 33 53 - -
Mupr4261g00004 334 MobiDBLite consensus disorder prediction 297 334 - -
Mupr4261g00004 334 MobiDBLite consensus disorder prediction 109 128 - -
Mupr4261g00004 334 SUPERFAMILY RING/U-box 131 189 - -
Mupr4261g00004 334 MobiDBLite consensus disorder prediction 79 102 - -
Mupr4261g00004 334 MobiDBLite consensus disorder prediction 1 25 - -
Mupr4261g00004 334 ProSiteProfiles Zinc finger RING-type profile. 136 177 IPR001841 -
Mupr4261g00004 334 MobiDBLite consensus disorder prediction 318 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4261g00004 Mupr-Chr4261 27826 29061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4261g00004 92 218 C3H Transcription Factor Family AT3G58030 42.647 1.41e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4261g00004 - - gmx:100794016 203.371