Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr425g00025 ATGAAAATTCAGTGTGATGTGTGTGAGAAGGCCCCGGCAACGGTGATTTGTTGTGCAGATGAGGCAGCTTTGTGTGCGAAATGTGATGTTGAAGTTCATGCTGCAAACAAGCTTGCTAGCAAGCACCAGAGGCTTCTCCTTCAATGTCTATCAAACAAGCTTCCCAGATGTGACATATGTCAAGATAAGGCAGCTTTCATATTTTGTGTTGAGGACAGAGCACTCTTCTGTAAAGACTGTGATGAACCAATTCATTTAGCTGGTAGCCTTTCTGCAAACCACCAGCGCTTCCTTGCTACTGGTATCCAGGTGGCTTTGGGTTCTCATTGCACCAAAGGCAATGAAAAAAGTCACATAGAACCATCTAATCCAAATGCACAAGAAGTTCCTGTGAAAGTTCCTTCTCAGCAATTGCCTAGCTTCACGTCCTCTTGGGCAGTTGATGACTTGTTGGAATTAACAGACTTTGAATCACCAGGCAAAAAGCAATCACTGGAGTTTGGAGAGCTTGAATGGCTAGCAGATGTGGGCCTTTTCAGTGAACAGTTTCCTCATGAAGCTTTAGCTGCCGCGGAAGTTCCTCAGCTTCCGGTGACACACACTAGCAGTGTTGCCTCACACAAAGCCCCTAAATCCTTCATGTCTTACAAAAAGCCCAGAATTGAAGTCCTAGACGAAGATGATGATGAGCACTTCACTGTACCTGATCTTGGCTAA 717 0.4505 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPRCDICQDKAAFIFCVEDRALFCKDCDEPIHLAGSLSANHQRFLATGIQVALGSHCTKGNEKSHIEPSNPNAQEVPVKVPSQQLPSFTSSWAVDDLLELTDFESPGKKQSLEFGELEWLADVGLFSEQFPHEALAAAEVPQLPVTHTSSVASHKAPKSFMSYKKPRIEVLDEDDDEHFTVPDLG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr425g00025 238 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mupr425g00025 238 CDD Bbox1_BBX-like 5 47 - -
Mupr425g00025 238 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 237 - -
Mupr425g00025 238 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Mupr425g00025 238 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Mupr425g00025 238 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Mupr425g00025 238 SMART bboxneu5 52 99 IPR000315 GO:0008270
Mupr425g00025 238 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mupr425g00025 238 CDD Bbox1_BBX-like 57 98 - -
Mupr425g00025 238 Gene3D Classic Zinc Finger 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr425g00025 Mupr-Chr425 197207 200101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr425g00025 1 161 Orphan Transcription Factor Family AT1G06040 67.857 1.15e-69 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mupr425g00025 zf-B_box 8.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr425g00025 - - gmx:100779183 458.759