Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr425g00021 ATGCCACTTCCGATGAAAGCAACGAGGGATTTCGACGAGTCGTCGAGTCCGTCGAACAACCTGTGGGTGGGGAATCTGGCGCCGGATGTGACGGACTCCGATCTGATGGAGCTCTTCGCCAAATACGGCGCGCTCGACAGCGTGACTTCGTATTCCGCTCGCAGTTACGCCTTCGTCTTCTTCAAGCGCGTCGAAGACGCCAAAGCCGCCAAAAACGCTCTACAAGGCATCTCTCTCCGTGGCAGCTCCTTAAAGATTGAGTTTGCCAGACCGGCAAAGGCATGCAAACAGCTTTGGGTGGGTGGTATTAGCCCAGCTGTTACAAAGGAAGAATTGGAAGCTGAATTTCGTAAATTTGGTAAAATTGAGGATTTTAAGTTCTTCAGAGACAGAAATACTGCATGTGTTGAATTTTTCAATTTGGAAGATGCTACTCAGGCCATGAAAATCATGAATGGGAAACGAATAGGTGGGGAGCATATTCGTGTTGACTTCCTTCGGTCACAATCTACAAAAAAGGATCAGTTGCCTGATTATGGGCAATTTCAAGGAAAAAACTTGGGGCCTACTGATGCTTATTCTGGACAGAAAAGACCACTGCATTCACAGCCTCCAATGGGGAGGAAAGGCGACACTCAACCAAGTAATATTTTGTGGATTGGTTATCCTCCTGCTGTTCAGATTGATGAGCAAATGCTGCACAATGCCATGATTTTATTTGGTGAAATTGAGAGAATCAAGAGTTTTCCTTTGAGAAACTATTCAATTGTTGAGTTTAGAAGTATTGATGAAGCTCGACGTGCAAAAGAGGGCCTTCAAGGACGTCTTTTTAATGATCCTCGAATAACAATTATGTATTCAAGCAGTGACCTAGTACCTGGCAATGATTACCCTGGCTTTTTTCCTGGAAGTACTGGGCCAAGACATGACGTATTGCTGAATGATCATCCATTTCGACCATTACAGATGGATGTATTTGGTCATAATCGTCCAATGGTTTCAAATAATTTTCCTGGACAGTTACCACCTAGTGGTATTATGGGACCAAATGTACCAATGCGACCTTTTGGTCCTCATGGTGGTGTTGAATCTGTTATTGCTGGCCCTGAGTTTAATGAGATTAATGCACTCCACAAATTTCAGGATGGTAGCTCCAAGAGTAACATGGGTCCAAACTGGAAAAGGCCATCTCCTCCTGCGCCAGGGATGCTTTCTTCTCCTGCACCAGGCGTTAGGCTTCCTACAAGATCAACCTCTGGTGCATGGGATGTACTTGATATAAACCATATTCCAAGAGATTCTAAGCGTTCAAGGATAGATGGATCTTTGCCTGTTGATGATGCCCCATTTCCTTTGAGGAATATAGATCAAACGTATGGGATTGATCCAGCTATTGATGGAGGTAGTTCTGGTTCATATGTAAGCATTCAAGGGAAGAGTCACCTTGGTACAGTGAGCTCAAGGATGACAGCTGGAGTACATGGTTTTGTCCAACCTGATTCTGATCATATATGGCGAGGAATTATTGCAAAAGGAGGAACTCCTGTTTGCCGTGCTAGATGTGTCCCAATTGGGAAAGGGATTGGGACTGAGCTTCCTGATGTTGTTGATTGCTCAGCTAGGACGGGACTGGATATACTCACAAAACATTATGCTGATGCAATTGGTTTTGATATTGTTTTCTTTCTGCCTGATAGTGAAGATGATTTTGCTTCGTATACTGAATTCCTTCGCTATCTTAGTGCGAAAAATCGTGCTGGTGTTGCCAAATTTGTTGATAACACCACCTTATTCTTGGTGCCTCCTTCTGATTTTCTTACTAAAGTTTTGAAAGTCACTGGACCTGAGCGTCTATATGGTGTGGTTCTTAAGTTTCCACCAGTGCCAAATAGTGCACCTATGCAACAACCATCACATTTGCCTATACAGGCAACTCAGTATATGCAGCAGATTCCTCATTCACAGACTGAATATGGTTTGATTCCAATGAAAGAGGAAACGGTTTTGCCAATGGATTATAACAGATCCTTGCATGAAGATTCTAATCTTCCTGCTAAAGCAGTCTATCCACCTACAGGTGGGCCCACTTCAGTTCATTCTGTGCCTCCAGATTACGCTCCTAATTCTACTGTTACTGGGTCCCAAGCTGGAGTTGCATTAACACCAGAGCTGATTGCAACTTTAGCTTCTTTTCTCCCTGCAACTACACAATCATCTGCCACTGATGGTGCCAAGTCAGCTGTAGGTTCCTCAACCATGAAGCCTCCATTTCCTCCTGTGGCACCAAATGATGGAAACCAATCTCATTTATGGAAACAGGATAATCAAATTGCAGATCAATCCACTCATCCTCCTCAACAGTTGAGGAATATGTATAATGCTCACAATGCTCACTATCAGCCTTATCCACCAGGATCTGCTCCTGCTGTCAATGCCGCTCATGTGGTCTCTGGCAGTGCTCATATCCAAGATACTGCTGCCAGCCTGCAGCAGCAAGGTGCTGTTTCATCAAGACACATGTCTAATTTTATGATCCCTACTCAAAGTGGACAGGTAGCAGTATCCCCCCATGCCAGTCAGCATTATCAAGTTGAAGCCTCCCCCAGCAATCAGAAAGGATTTGGAGTGGTGCAGGGAACAGATGCCTCTGTTTTATACAATTCTCTGGCTTTCCAGCAACCTAATAATTCTATTGCCCTATCTAATCAAGTTAACAATGCTAATCCTTCACATCTGCAAACTGCCATGCCATATACAGTGGACCAAGTAAACTCAGACCCCCCCAACCAGCAACTTCCTATTTTTGGAGCCGGTCAAGGCACATCAGAAGTGGAGGCTGATAAGAACCAGAGATACCAGTCAACATTACAGTTTGCTGCCAATCTTCTTCACCAAATACAACAGCAGCAGCAACAGCAAGCCCCAGGAGGACATGGGCCAGGAATTCAACAATGA 2955 0.4443 MPLPMKATRDFDESSSPSNNLWVGNLAPDVTDSDLMELFAKYGALDSVTSYSARSYAFVFFKRVEDAKAAKNALQGISLRGSSLKIEFARPAKACKQLWVGGISPAVTKEELEAEFRKFGKIEDFKFFRDRNTACVEFFNLEDATQAMKIMNGKRIGGEHIRVDFLRSQSTKKDQLPDYGQFQGKNLGPTDAYSGQKRPLHSQPPMGRKGDTQPSNILWIGYPPAVQIDEQMLHNAMILFGEIERIKSFPLRNYSIVEFRSIDEARRAKEGLQGRLFNDPRITIMYSSSDLVPGNDYPGFFPGSTGPRHDVLLNDHPFRPLQMDVFGHNRPMVSNNFPGQLPPSGIMGPNVPMRPFGPHGGVESVIAGPEFNEINALHKFQDGSSKSNMGPNWKRPSPPAPGMLSSPAPGVRLPTRSTSGAWDVLDINHIPRDSKRSRIDGSLPVDDAPFPLRNIDQTYGIDPAIDGGSSGSYVSIQGKSHLGTVSSRMTAGVHGFVQPDSDHIWRGIIAKGGTPVCRARCVPIGKGIGTELPDVVDCSARTGLDILTKHYADAIGFDIVFFLPDSEDDFASYTEFLRYLSAKNRAGVAKFVDNTTLFLVPPSDFLTKVLKVTGPERLYGVVLKFPPVPNSAPMQQPSHLPIQATQYMQQIPHSQTEYGLIPMKEETVLPMDYNRSLHEDSNLPAKAVYPPTGGPTSVHSVPPDYAPNSTVTGSQAGVALTPELIATLASFLPATTQSSATDGAKSAVGSSTMKPPFPPVAPNDGNQSHLWKQDNQIADQSTHPPQQLRNMYNAHNAHYQPYPPGSAPAVNAAHVVSGSAHIQDTAASLQQQGAVSSRHMSNFMIPTQSGQVAVSPHASQHYQVEASPSNQKGFGVVQGTDASVLYNSLAFQQPNNSIALSNQVNNANPSHLQTAMPYTVDQVNSDPPNQQLPIFGAGQGTSEVEADKNQRYQSTLQFAANLLHQIQQQQQQQAPGGHGPGIQQ 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr425g00021 984 Gene3D - 206 297 IPR012677 -
Mupr425g00021 984 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 216 289 IPR000504 GO:0003723
Mupr425g00021 984 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 96 168 IPR000504 GO:0003723
Mupr425g00021 984 Gene3D - 94 175 IPR012677 -
Mupr425g00021 984 Gene3D - 4 93 IPR012677 -
Mupr425g00021 984 SMART rrm1_1 97 164 IPR000504 GO:0003723
Mupr425g00021 984 SMART rrm1_1 20 87 IPR000504 GO:0003723
Mupr425g00021 984 SMART rrm1_1 217 285 IPR000504 GO:0003723
Mupr425g00021 984 CDD RRM_SF 21 87 - -
Mupr425g00021 984 FunFam Flowering time control protein FPA 11 93 - -
Mupr425g00021 984 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 19 91 IPR000504 GO:0003723
Mupr425g00021 984 MobiDBLite consensus disorder prediction 382 417 - -
Mupr425g00021 984 SUPERFAMILY RNA-binding domain, RBD 195 294 IPR035979 GO:0003676
Mupr425g00021 984 MobiDBLite consensus disorder prediction 172 212 - -
Mupr425g00021 984 PANTHER RNA RECOGNITION MOTIF-CONTAINING 16 966 - -
Mupr425g00021 984 Pfam SPOC domain 499 616 IPR012921 -
Mupr425g00021 984 MobiDBLite consensus disorder prediction 737 769 - -
Mupr425g00021 984 MobiDBLite consensus disorder prediction 683 709 - -
Mupr425g00021 984 SUPERFAMILY RNA-binding domain, RBD 95 189 IPR035979 GO:0003676
Mupr425g00021 984 FunFam flowering time control protein FPA 209 302 - -
Mupr425g00021 984 CDD RRM_SF 98 164 - -
Mupr425g00021 984 SUPERFAMILY RNA-binding domain, RBD 9 92 IPR035979 GO:0003676
Mupr425g00021 984 FunFam Flowering time control protein FPA isoform A 94 208 - -
Mupr425g00021 984 Coils Coil 949 969 - -
Mupr425g00021 984 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 21 84 IPR000504 GO:0003723
Mupr425g00021 984 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 228 282 IPR000504 GO:0003723
Mupr425g00021 984 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 98 161 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr425g00021 Mupr-Chr425 155641 162648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr425g00021 18 279 Eukaryotic Initiation Factors Gene Family AT4G34110 22.300 5.50e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr425g00021 - - gmx:100777570 1772.67