Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr425g00012 AAGCCCCTGGTGCAAATTTTTATTCAAAGGGACTCTAACATTGATCAAATTTCAACTTCAAATTTTTTCTTCAACCTAATCATGGAAGACCATTTTTCCCCTAATGGAAAGGAAATTGGCTATTGCACACCTTCTGGGGATCAGTTGGAGGAATCAACATCAGAGGATGGTGGAATGAAAAACTCATCTTCAGATGACATGTTTAACAACTTCTCAGAGATCATGAACTTTGATACCTATGCTGGTTGGAGCAATAGCCCATCCATAACTGATCAGAGTTGGGCTAATGTGCTTTCATCATTTTCCTCAGCACCATATCCACTACCTGATGGATTGAATTTAGTGGAACACAGCAATGGTTCATTCTTTATGACAGAAGTTAGTGAAATTCACAATGGTATGGAAAGTTCTCCTAGTTCTGGGGATAGGGTTATTTTTCAGCAAATGGACATTCAACTAGGGTTCTTAGATGAAGCAAATGATGCAAGTAACTTTGATTCAAAACACAAACTTAATGGCACATCTCAGCAACTTAATAATACCTCAGACATGTGCAATTACATAATCTCAAGGTCTTCAGGTCGGTCACTTGATGATAGAATGCTGAGGGCTTTGTCCTTCTTTATGGAATCAGCTGATGGTGGAATGTTGGCTCAAGTTTGGGTGCCTATAAAGCATGGTGATGAATTCATCTTAAGCACAAGTGAACAACCTTATTTGCTAGATCCAAAGCTTGCAGGGTACCGTGAAGTGTCAAGGGCATTTACATTTTCTGCAGAAGGAAAGCCAGGATCATGTCCGGGGCTTCCTGCTCGTGTGTTTAGATCTCATGTCCCTGAATGGACCTCCAATGTTGGTTACTACAATAAGACTGAGTACTTAAGGTTGGAGCATGCAATGAATCATGAGATTCGCGGATCCATTGCTCTTCCTATATCTGATGTGCACTCTCAAGTGCCATGTGCTGTATTAGAACTAGTCACCACAAAGGAAAAGGCTAATTTTGACAGAGAATTTGAAATTGTTTCTCATGCACTCCAGGTGGATTTTTGTTTTGCTGTTTCTAGCATATACTTCAATTTTCTTATATATGTTACCATCGAAGGTACTAATGATAGATGTCCTTATGATGACTTTATGCAGCTTGTAAATTTAAGGACTGCTATGCCTCCGCGACTTCTTCCCCAGTGTCTATCAAGTAACAAAAGAGCTGCTTTAACAGAGATAATTGATGTGTTACGCGCCGTGTGTCATGCACATAGATTGCCACTTGCACTGACATGGATTCCCTGTTGCTACAGTGAGGGAATAGGAGAAGAAACTGAGAGAATAAGAATCAAAGAGGGTCATAAAAGTTCTAATGAAAAATGTGTACTATGTATTGAAGAATCAGCTTGCTATGTAAATGACAGAGCTATAGGAGGATTTGTTCATGCATGCCTTGAACATTATCTTGAGGAAGGGCAAGGTATAGCGGGGAAAGCTCTTCTATCAAATCATCCATTCTTCTATACTGATGTGAAGACATATGATATTGGTGAATATCCCCTTGTTCATCACGCGCGCAAATATAACTTGAATGCTGCAGTGGCAATTAGGCTAAGGAGTACATATACCAATGATGATGATTACATAATAGAATTCTTTCTGCCTGTGAATATGACAGGGAGTTCAGAACAGCAACTTTTATTGGACAATCTCTCCGGTACCATGCGGAGAATTTGTAGGAGTTTGAGGACAGTTTCAGATGCTGAGTTAACAAGAATACAAGGCTTCCAATCTGAGTTTCCTAAGGAAAATGTCCCAAGTTTTTTTCCCATGTCCACCAGAAACTCTGAGATAGCATTTATAAATGATGACCATGATTTGGTCCAGAAGATGTCCTTGAAGGCATCTAACATGAGAAATAATGGAATTGAAGCTGCTCACAGCCAGGCAATGAATGGATCAAGAAAGCAGGTTGAGAAAAAGAGAAGTACAGTGGAGAAGAATGTTAGCTTGAGTGTTCTCCGACAATACTTTTCCGGTAGTCTGAAAGATGCTGCAAAAAGCATTGGTGTTTGCCCAACAACTCTAAAAAGGATATGCAGGCAACATGGGATTTCAAGATGGCCATCCCGCAAGATCAATAAAGTGAATCGTTCATTAAAGAAGATACAGATTGTGCTTGATTCTGTCCAGGGAGTGGAAGGAGGGTTGAAGTTTGATCCTTATACTGGGGGGTTTATAGCTGGAGGATCAATCATTCAGGAAACTGAATCACATAAATATCTTCTATTTCCTGAGAAAAGTTCTGTGAAAGACCCTAAGCCTACAACACAAAAAGCAGCCTCAGTAGTTTCAGCACCTGGCAGCACTAGTGACAATTCAACAATTAAGTTGGATGATAATGATGGTGTTTGTTTGATGGGAAACCCGCTTGTGCACCCAAGAAGTGTGCTTATATCCAATAATACTAGTGAGGGTGAATTGAAGAAAGACAATGTTTCTTCTGATGATTGTTGTGAAGATTCAAAATCAGTGGCCATGAATGATGCATCATGCAAGAAAGCCTGCCTTTGGACCAAGACTCAGGATTGTCCTGAACAAACTTGTTCAATATCCTTGGTTACTGATGAGGTTGAGGTTGAAGTTGGTGTACATGAGGGTGAAGGAGCTGATGAACATAACCATCCTACTTCTTCAAGCACCACAAACTCATCCAATGGCTTTGGCTCAATGATGCATGGAAGCTCTTCATGCTCTCAAAGCTTTGAGAACCAAAAGCATTCAAGAGTCACACCATCTTGTGTTGATAGCGGGTCAAAAATTATTGTGAAAGCTAGTTATAGGGGAGATACTATTCGTTTCAAGTTTGATCCATCCGCAGGTTGTTTCCAACTATATGAAGAAGTTGCAACAAGGTTCAAACTACAAAATGGGTCATTCCAGCTCAAATATCTAGATGATGAAGAGGAATGGGTGATGTTGGTGAATGACTCTGATTTGCAAGAGTGTACTGAAATTTTGGATGACATTGGCACTCGTTGTGTGAAGTTTCTTGTCCGTGATGTGCCTTGTGTTTTAAGCAGCCGTGGCAGCAACACTCCACCAAAACCCTGGGAGAAAGCACCAACACCAGCATCTGGGGCAGCACCTTTTAAACCCCCATCAGCAGGTAGCACAAGTGATGTAGTTGAGGCTTCAGGGACTGCAAGGCCTGGGGAAATAGTTTCGGCTTCCGATAAGATTGCAACTGTCAATAGAAATGCGCTTGGGAAACCCCTTCCCACAAGGCCATGGGAGCAGAATTATGGAAGTTCTAGCTTTGGAGGTTATAGTTCTACAATGAATTATAATTCTGGATATGGATCTTATGGTGGAGTGGGAGGAGGGATGTATGGTGGAGGAATGTATGGCAACAATATGTACAGGGGAGGATATGGGGGGCTTTATGGCTCCTCTGGGATGTATGGAGGAGGAATGTATAATGGTGGCTTTGGTGGGCCAATGGGTGGTTATGGCATGGGTGGTGGTCCTTATGGAGTTGAAGATCCCAATAATCCATATGGTGCTCCTCCATCGCCCCCAGGATTTTGGATTTCTGTTTTACGTGTGATGCAAGGCGTGGTTAACTTCTTTGGCCGGATTTCAATTCTTGTAGACCAGAACACGCAGGCTTTCCATTTGTTCATGACTGCACTTCTTCAGCTTTTTGATCGCTCTGGTGTATTGTATGGAGAGCTAGCTAGATTTGTGTTGCGGTTGCTTGGAATCAGAACCAAGCCCAAGAAGATTAACCCTCCAGGTCCAGATGGACTTCCACTACCTGGGCCACACAATATGGAGGGGACAAAGGCTGCTCCAAGTGGTTCTTGGGACAATGTATGGGAAAATGACACCAAGAAATGA 3891 0.4181 KPLVQIFIQRDSNIDQISTSNFFFNLIMEDHFSPNGKEIGYCTPSGDQLEESTSEDGGMKNSSSDDMFNNFSEIMNFDTYAGWSNSPSITDQSWANVLSSFSSAPYPLPDGLNLVEHSNGSFFMTEVSEIHNGMESSPSSGDRVIFQQMDIQLGFLDEANDASNFDSKHKLNGTSQQLNNTSDMCNYIISRSSGRSLDDRMLRALSFFMESADGGMLAQVWVPIKHGDEFILSTSEQPYLLDPKLAGYREVSRAFTFSAEGKPGSCPGLPARVFRSHVPEWTSNVGYYNKTEYLRLEHAMNHEIRGSIALPISDVHSQVPCAVLELVTTKEKANFDREFEIVSHALQVDFCFAVSSIYFNFLIYVTIEGTNDRCPYDDFMQLVNLRTAMPPRLLPQCLSSNKRAALTEIIDVLRAVCHAHRLPLALTWIPCCYSEGIGEETERIRIKEGHKSSNEKCVLCIEESACYVNDRAIGGFVHACLEHYLEEGQGIAGKALLSNHPFFYTDVKTYDIGEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYIIEFFLPVNMTGSSEQQLLLDNLSGTMRRICRSLRTVSDAELTRIQGFQSEFPKENVPSFFPMSTRNSEIAFINDDHDLVQKMSLKASNMRNNGIEAAHSQAMNGSRKQVEKKRSTVEKNVSLSVLRQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQIVLDSVQGVEGGLKFDPYTGGFIAGGSIIQETESHKYLLFPEKSSVKDPKPTTQKAASVVSAPGSTSDNSTIKLDDNDGVCLMGNPLVHPRSVLISNNTSEGELKKDNVSSDDCCEDSKSVAMNDASCKKACLWTKTQDCPEQTCSISLVTDEVEVEVGVHEGEGADEHNHPTSSSTTNSSNGFGSMMHGSSSCSQSFENQKHSRVTPSCVDSGSKIIVKASYRGDTIRFKFDPSAGCFQLYEEVATRFKLQNGSFQLKYLDDEEEWVMLVNDSDLQECTEILDDIGTRCVKFLVRDVPCVLSSRGSNTPPKPWEKAPTPASGAAPFKPPSAGSTSDVVEASGTARPGEIVSASDKIATVNRNALGKPLPTRPWEQNYGSSSFGGYSSTMNYNSGYGSYGGVGGGMYGGGMYGNNMYRGGYGGLYGSSGMYGGGMYNGGFGGPMGGYGMGGGPYGVEDPNNPYGAPPSPPGFWISVLRVMQGVVNFFGRISILVDQNTQAFHLFMTALLQLFDRSGVLYGELARFVLRLLGIRTKPKKINPPGPDGLPLPGPHNMEGTKAAPSGSWDNVWENDTKK 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr425g00012 1296 PANTHER PROTEIN NLP8 140 1025 IPR045012 GO:0003700
Mupr425g00012 1296 MobiDBLite consensus disorder prediction 890 916 - -
Mupr425g00012 1296 MobiDBLite consensus disorder prediction 1257 1296 - -
Mupr425g00012 1296 MobiDBLite consensus disorder prediction 1024 1059 - -
Mupr425g00012 1296 Pfam PB1 domain 939 1017 IPR000270 GO:0005515
Mupr425g00012 1296 Gene3D - 932 1015 - -
Mupr425g00012 1296 MobiDBLite consensus disorder prediction 46 62 - -
Mupr425g00012 1296 ProSiteProfiles PB1 domain profile. 936 1018 IPR000270 GO:0005515
Mupr425g00012 1296 CDD PB1_NLP 937 1017 IPR034891 -
Mupr425g00012 1296 Pfam RWP-RK domain 664 712 IPR003035 -
Mupr425g00012 1296 SUPERFAMILY CAD & PB1 domains 932 1020 - -
Mupr425g00012 1296 MobiDBLite consensus disorder prediction 883 916 - -
Mupr425g00012 1296 MobiDBLite consensus disorder prediction 43 62 - -
Mupr425g00012 1296 ProSiteProfiles RWP-RK domain profile. 644 732 IPR003035 -
Mupr425g00012 1296 SMART PB1_new 936 1018 IPR000270 GO:0005515
Mupr425g00012 1296 MobiDBLite consensus disorder prediction 764 790 - -
Mupr425g00012 1296 MobiDBLite consensus disorder prediction 770 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr425g00012 Mupr-Chr425 68973 77489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr425g00012 28 1026 NLP Transcription Factor Family AT2G43500 47.796 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mupr425g00012 PB1 7.5e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr425g00012 - - gmx:100793770 1636.7