Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4255g00001 ATGGAGTACGGAAGGTTGGGACCCTCACACGCTCCTTCGGTTAATCCAAGATCCTCCGTCAAGAAGAAGATCATTATGCTGTCAATTCTAGCCGTCCTGTTAATCGTCGCCTCCGTCGTCACTGCCGTCGCGGTTCACTCCCGCGCTGGACGCGCGGATTCGAGTGGGCCTGGGCTCCGCGGGAGGCCCACGCAGGCTATTTCACGCACGTGCAGCAAAACGCGGTTCCCGACGCTGTGCGTGACCTCGCTCCTCGACTTTCCGGGATCGGCCACGGCGTCGGAGAAGGACCTGGTCCACATTTCCTTCAACGTGACGCTGCAGCACTTCTCGAAGGCGCTCTACTCCTCCGCCGCGATGTCGTACGCCACCATGGAACCCCGCGTCCGCGCCGCTTACGACGACTGCCTCGAGCTCCTCGACGACTCCGTCGACGCGCTCGCCCGCTCCCTCAACACCGTCTATCTCGGCGCCGTCGGCGGAGCCGACGATGACGTGGTGACGTGGCTCAGTTCCGCGCTCACCAACCAGGACACCTGCGCGGAGGGCTTCGCCGACTCCGCCGGCCCCGTCAAGGACCAGATGGCCAACAACATGAAGGACTTGTCGGAGCTGGTGAGCAACTGTCTCGCGATATTCTCCTCCGCCGGCGACGACTTCGCCGGTGTCCCCATTCAGAATAAAAGGCGATTGATGGCAATGCGAGACGATAATTTCCCGAGATGGTTGAATCGGCGAGATAGGAGATTGCTGACCTTGCCTCTGTCGGCGGTACAAGCCGATGTTGTGGTTTCCAAGGACGGTAACGGAACCGTTAAAACCATCGCCGAGGCCATTAAGAAGGTGCCGGAGTATAGTTCACGGCGCTTCATTATCTACGTCAGGGCAGGAAGGTATGAAGAGGACAATTTAAAGTTGGGGAGGAAGAAAACAAATGTGATGCTCATAGGAGACGGGAAGGGCATAACCGTCATCACGGGCGGAAAAAATTATATGGAAAACCTGACGACATTTCACACCGCATCCTTTGCTGCTAGTGGTTCTGGTTTCATCGCAAAAGACATGACGTTCGAGAACTACGCCGGGCCGGGGAAGCACCAAGCGGTGGCTCTCCGCGTCGGAGCGGACCACGCGGTGGTGTACCGCTGCAACATCATCGGATACCAAGACACAATGTACGTCCACTCGAACCGTCAATTTTTCCGCGAATGCGACATTTACGGAACCGTGGACTTCATATTCGGCAACGCCGCAGTGGTTTTACAAAACTGCAGCCTCTACGCTCGCAAGCCCATGGCCCAACAGAAGAACACGATCACGGCCCAAAACAGAAAAGACCCAAACCAGAACACGGGCATTTCGATCCACAACTGTCGGATTCTGGCGACGTCGGATCTGGAAGCATCGAAGGGTAGCTACTCCACTTATCTGGGTCGTCCCTGGAAACTTTACTCTAGAACCGTCTACATGTTATCCTACATAGGGGATCACGTACATCCACGTGGATGGCTGGAGTGGAACACTTCGTCGTTTGCTTTAGACACATTGTACTATGGTGAATACATGAATTCTGGGCCGGGTGCAGCCGTGGGCCAACGGGTTAATTGGCCCGGGTATCGGGTCATCACTTCCACGGTGGAAGCTTCTAGATTCACGGTGGGCCAATTCATATCGGGCTCGTCTTGGTTGCCTTCTACCGGAGTTGCATTCGTTGCTGGGTTATCAACCTGA 1731 0.5609 MEYGRLGPSHAPSVNPRSSVKKKIIMLSILAVLLIVASVVTAVAVHSRAGRADSSGPGLRGRPTQAISRTCSKTRFPTLCVTSLLDFPGSATASEKDLVHISFNVTLQHFSKALYSSAAMSYATMEPRVRAAYDDCLELLDDSVDALARSLNTVYLGAVGGADDDVVTWLSSALTNQDTCAEGFADSAGPVKDQMANNMKDLSELVSNCLAIFSSAGDDFAGVPIQNKRRLMAMRDDNFPRWLNRRDRRLLTLPLSAVQADVVVSKDGNGTVKTIAEAIKKVPEYSSRRFIIYVRAGRYEEDNLKLGRKKTNVMLIGDGKGITVITGGKNYMENLTTFHTASFAASGSGFIAKDMTFENYAGPGKHQAVALRVGADHAVVYRCNIIGYQDTMYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHNCRILATSDLEASKGSYSTYLGRPWKLYSRTVYMLSYIGDHVHPRGWLEWNTSSFALDTLYYGEYMNSGPGAAVGQRVNWPGYRVITSTVEASRFTVGQFISGSSWLPSTGVAFVAGLST 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4255g00001 576 FunFam Pectinesterase 255 574 - -
Mupr4255g00001 576 Pfam Pectinesterase 261 559 IPR000070 GO:0030599|GO:0042545
Mupr4255g00001 576 CDD PMEI-like_3 71 214 - -
Mupr4255g00001 576 SMART PMEI_2 62 212 IPR006501 GO:0004857
Mupr4255g00001 576 FunFam Pectinesterase 63 216 - -
Mupr4255g00001 576 SUPERFAMILY Pectin lyase-like 256 573 IPR011050 -
Mupr4255g00001 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 216 IPR035513 -
Mupr4255g00001 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 214 IPR035513 -
Mupr4255g00001 576 Pfam Plant invertase/pectin methylesterase inhibitor 66 212 IPR006501 GO:0004857
Mupr4255g00001 576 PANTHER PECTINESTERASE 34 564 - -
Mupr4255g00001 576 NCBIfam pectinesterase inhibitor domain 47 214 IPR006501 GO:0004857
Mupr4255g00001 576 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
Mupr4255g00001 576 Gene3D - 255 574 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4255g00001 Mupr-Chr4255 20027 24415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4255g00001 1 575 Carbohydrate Esterase AT5G53370 66.440 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4255g00001 - - gmx:100808236 949.503