Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4254g00007 ATGGTGCAGCGTCTCACCTACCGCAAGCGACACAGTTATGCCACCAAGTCCAACCAGCACAGGGTTGTCAAGACCCCGGGTGGAAAACTCGTTTATCAGACCACTAAGAAGAGGGCTAGCGGACCTAAGTGCCCCGTCACTGGCAAGAGGATTCAGGGGATTCCACACTTGAGGCCTACAGAATATAAGAGGTCAAGGTTACCTAGAAACCGTAGGACTGTTAACCGTGCATATGGTGGAGTTTTGTCTGGAAGTGCTGTCAGGGAAAGGATTATCCGAGCTTTCTTAGTTGAAGAGCAAAAGATTGTGAAGAAGGTCTTAAAGATCCAGAAGACAAAGGAAAAGCAGGCCTTGAAGGTGTACCCTAACCTTTAG 375 0.4853 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQALKVYPNL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4254g00007 124 Gene3D - 1 37 - -
Mupr4254g00007 124 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mupr4254g00007 124 Gene3D - 39 120 - -
Mupr4254g00007 124 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Mupr4254g00007 124 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mupr4254g00007 124 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mupr4254g00007 124 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mupr4254g00007 124 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Mupr4254g00007 124 PANTHER 60S RIBOSOMAL PROTEIN L34 1 116 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4254g00007 Mupr-Chr4254 22337 24495 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4254g00007 1 119 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 92.437 7.62e-76 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4254g00007 K02915 - gmx:100499882 215.312