Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4251g00007 ATGGCCGAAACAAAATTGATTCCAGGGTTTCGGTTTCATCCCACTGACGTTGAGCTGATTGAGTATTTTCTGAAGAGGAAGGTCAAGGGTAAGAAATTCCCTTTCGATGTAATTGCTGAACTTGACTTGTACAAGTATGCTCCGTGGGATCTCCCAGATATGTCTTTGCTCAAAAGTGGGGATTTGGAATGGTACTTCTTTTGCCCTCGGGGGAAGAAGTACTCGACTGGAGGGAGGATGAATCGTGCCACGGAGGCTGGGTATTGGAAGACTACTGGGAAGGATAGGGAAATTGAACACAAGAACCGAGTTGTGGGGATGATAAAAACACTGGTTTTTCACATTGGTAAAGCGCCTAAGGGAGACCGAACTGATTGGGTTATGCATGAGTTTAGACTTGACGATAAGGATCTGGCTGATAAAGGCGTTTTGCAGGACTCCTATGTGATTTGTAGGGTATTCCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAGTATGGTAAACCATTTAATGAGAAAGACTGGGATACAGAAGAGGAAATTGATTCTGTACAATCTGCCCCTGTTGCTGCTGTGTCTGCACCTGATCCTATACAACCTAATAAAAGTCATACTACTGAAGTAAATGACATCCATCCCTCTACAAGTGGATGCGTCGGATTGACATCTGTATCATGTCTATCAGAATTGATGCCCTCTTGCTCAGCACATCCTTCCGCCCCAAACAATCAAGTTGACGATGGCATTTTATCTTTGCTTGATTCTTTCACAGAAGATGATGACACATTGGTTGAGAATGAAAATAATAGAATTGAGAAGGTTGATGATCCTGATCAAGCAAACAATGCTGAATGTGCTCCATGTTCAGATCCAGATGCGATTTTTAAGGACTTAGGAGACCTTCACAGCTTGTTTGGATTAGGTGAAGGCAGTTTTTCCTGTGGCCAGAAAAATGAATATACTACAAATGAAATGCTTTATACAGGTGATCTATTCGAGTATCGAGACGCCCAAGACTTCTTGGAGTTGAGTGACCTAGAGGCGCCACAGCTCTGGCAGAATAAACATGGAACACCGCAGGAGGAGGAAAGCCCCAGTAGTAGCATCATCAAAAGGCAAATTGACAAGAGGGGAAGGGGGTGGAAAACATGTGCAGACAGACCCAAGTCTCTGAATTCTGATTGCCTCAGGAGATTAATCATCCTTTATTTTGATTAG 1221 0.4365 MAETKLIPGFRFHPTDVELIEYFLKRKVKGKKFPFDVIAELDLYKYAPWDLPDMSLLKSGDLEWYFFCPRGKKYSTGGRMNRATEAGYWKTTGKDREIEHKNRVVGMIKTLVFHIGKAPKGDRTDWVMHEFRLDDKDLADKGVLQDSYVICRVFQKEGPGPRNGAQYGKPFNEKDWDTEEEIDSVQSAPVAAVSAPDPIQPNKSHTTEVNDIHPSTSGCVGLTSVSCLSELMPSCSAHPSAPNNQVDDGILSLLDSFTEDDDTLVENENNRIEKVDDPDQANNAECAPCSDPDAIFKDLGDLHSLFGLGEGSFSCGQKNEYTTNEMLYTGDLFEYRDAQDFLELSDLEAPQLWQNKHGTPQEEESPSSSIIKRQIDKRGRGWKTCADRPKSLNSDCLRRLIILYFD 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4251g00007 406 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Mupr4251g00007 406 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 240 - -
Mupr4251g00007 406 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Mupr4251g00007 406 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Mupr4251g00007 406 FunFam Nac domain-containing protein 86 15 159 - -
Mupr4251g00007 406 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4251g00007 Mupr-Chr4251 32788 36232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4251g00007 1 305 NAC Transcription Factor Family AT5G09330 47.112 1.31e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr4251g00007 NAM 3.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4251g00007 - - adu:107470479 503.442