Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr424g00006 ATGGGTCGCCATTCCTGTTGTTTAAAGCAAAAACTAAGGAAAGGTTTATGGTCTCCCGAAGAAGATGAGAAGCTATTCAATTACATAACCAGATTCGGTGTTGGCTGCTGGAGCTCCGTTCCCAAACAAGCTGGACTTCAAAGGTGTGGAAAGAGTTGCAGGTTGAGATGGATAAACTATTTGAGGCCTGATTTGAAGAGAGGAATGTTCTCTCAGCAGGAGGAGGATCTTATAATTAGTCTTCATGAAGTTCTAGGAAATAGGTGGGCTCAAATTGCAGCTCAATTACCAGGGAGAACAGACAATGAGATTAAGAACTTTTGGAATTCATGTTTGAAGAAGAAGCTAATGAAGCAAGGGATTGACCCTGCAACACACAAGCCTCTCCTCAATATTGAAGATCACATGATAAAGGAAGAGAAGGAAACCAAAGAGACACCAACTATGCTATTACCAGTAATGTCTCAAGGGGTTTTAGTTTCCCCACAAGAGTCACCACTTGTATTGAACAATTCAAATTACTATGATGGTGTTGAGCTAGCAGTAACTGAAGCTTCAAGTGAAGTTTTCATGAGCAAGCCTGCATTGGACCCTTTGTCCTACTTTGAATTCCAAATGGGTTACAATTCAAGTGTGATTCAGAACCATGTGGGAACCAATTCAAGCTACGGATTCTCCTCATTGCCGTGTCTGAATAGTTCTGATCACGTGTCGGTGGCAGAGTTTTCGGATAACAACTCGGCTTCTAAAATCAGTTCTTTGTTGAAGGAAAGTTCCAGCAATAGCTCAAGCATCAGCGTTTATCCAGGGTGTCAAATGAGTAGCAATAGTGTGATGGAAAATGCGGGGTTCTCGTGGGATTGTGAGAACAAGATTGATCCTTTGTTACAGTTTCAAGTCAATGTCGTAAAATCTGAAGAGTTCAAGACAAGCTCGTGGCAGCAAGAAGGCCAGATTCTCACTCAGAATTCAATAGATTTCACTAGCTACCCATTAATGTCGCTGTCCGAGGATCTAACGGGGGCGAATTTTGATGTCTTCCAGCATATGTGA 1053 0.4207 MGRHSCCLKQKLRKGLWSPEEDEKLFNYITRFGVGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQGIDPATHKPLLNIEDHMIKEEKETKETPTMLLPVMSQGVLVSPQESPLVLNNSNYYDGVELAVTEASSEVFMSKPALDPLSYFEFQMGYNSSVIQNHVGTNSSYGFSSLPCLNSSDHVSVAEFSDNNSASKISSLLKESSSNSSSISVYPGCQMSSNSVMENAGFSWDCENKIDPLLQFQVNVVKSEEFKTSSWQQEGQILTQNSIDFTSYPLMSLSEDLTGANFDVFQHM 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr424g00006 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr424g00006 350 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr424g00006 350 CDD SANT 70 109 IPR001005 -
Mupr424g00006 350 Gene3D - 11 67 - -
Mupr424g00006 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr424g00006 350 CDD SANT 17 61 IPR001005 -
Mupr424g00006 350 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr424g00006 350 SMART sant 66 114 IPR001005 -
Mupr424g00006 350 SMART sant 13 63 IPR001005 -
Mupr424g00006 350 PANTHER MYB DOMAIN PROTEIN 55 1 276 - -
Mupr424g00006 350 FunFam Transcription factor MYB86 69 139 - -
Mupr424g00006 350 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mupr424g00006 350 FunFam Myb transcription factor 11 67 - -
Mupr424g00006 350 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr424g00006 350 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mupr424g00006 350 Gene3D - 69 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr424g00006 Mupr-Chr424 48171 49418 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr424g00006 1 133 MYB Transcription Factor Family AT4G01680 84.962 1.17e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr424g00006 Myb_DNA-binding 2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr424g00006 K09422 - gmx:100799243 536.184