Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4236g00002 ATGGTAGACGAAGCAAGTATATCATCCAGGTCGTTTTCTGGAAGAGTTAGTGATGATAAAGCTAATAGAAGTGGAAGGAGGGGCATGGTTCTTCCTTTTCAACCTCTATTCCTCACTTTTGATGAGATCAAATATTCTGTAGACATGCCACAGGAAATGAAAAAGCAAGGAGTTTTTGAGGAACGTCTAGAACTGTTGAAGGGTGTTAGCGGTGTCTTTAGGCCAGGAGTACTAACAGCTCTAATGGGTGTAAGTGGTGCTGGTAAGACTACTTTAATGGATGTTCTAGCTGGAAGGAAAACTGGTGGATATATTGAAGGAAACATCACAATATCTGGCTATCCAAAGAGGCAAGAAACATTTGCTCGCATTTCAGGATATTGTGAACAATTTGACATCCACTCACCCAATGTCACAGTCTATGAATCCTTGCTATATTCTGCATGGCTTCGGTTACCCCGTGAAGTTGATCGTGCTACTAGAAAGATGTTCATTGAGGAAGTTATGGAGCTGGTAGAGCTTAACTCAATAAGAGAAGCACTTGTTGGATTGCCAGGAGAGACTGGGCTTTCAACCGAGCAGCGCAAGAGGCTAACAATTGCAGTTGAACTTGTATCCAACCCTTCAATAATCTTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTGATGAGAACCGTGAGGAACACCGTGAACACTGGACGAACCGTTGTTTGCACCATCCACCAGCCAAGTATTGACATATTTGATGCCTTTGATGAGCTGTTACTTTTGAAATTGGGAGGGGAGCAAATATATGCTGGTCCATTAGGCCGCCACTGTTCCCATCTGATTCAGTACTTTGAGGCTATTCAAGGAGTTCCTAAGATCAGAGATGGTTATAATCCTGCAACCTGGATGTTGGAAGTTACATCAGCAGGAACAGAATCAAGTCTTAAAGTCAACTTCACAAATGTGTACAGAAACTCAGAACTATATCGGAGAAACAAACAACTGATCCAAGAGCTTAGCATACCTCCTCAAGGTTCAAAGGATCTACACTTTGATATTACCTTCATTGGAGTACAAAATGGTGCCTCAGTGCAGCCTATAATAGCAGTAGAGAGAACTGTCTTCTACAGAGAGAGAGCTGCTGGAATGTATTCAGCTTTGCCCTATGCACTTGCACAGGTTATTATTGAACTTCCCCATATCTTGGTTCAGACCTTGATGTATGGGCTTATAGTATATGCCATGATGGGATTCGATTGGACCACATCAAAGTTCTTGTGGTATCTTTTCTTCATGTACTTCACTTTCTTATACTACACCTTATATGGTATGATGACCATGGCCATTACCCCCAACGCACACGTTGCTGGCATATTGTCCAGTGCATTCTATGCGATATGGAGCCTTTTCTCAGGCTTCATCATCCCATTATCTAGAATACCCATATGGTGGAAGTGGTACTATTGGATTTGCCCAGTTGCATGGACCTTGTACGGATTGGTGGCTTCCCAATATGGAGACAATAGGGACACACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTGAGGAGTTATTTTGGGTTTGAACATGATTTTCTAGGAGTAGTTGCAATTGTGGTGGCGGGTTTCTCGGTATTATTTGCACTAATCTTCGCCTTTGGAATCAAAGCATTCAACTTCCAAAAACGATGA 1698 0.4252 MVDEASISSRSFSGRVSDDKANRSGRRGMVLPFQPLFLTFDEIKYSVDMPQEMKKQGVFEERLELLKGVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKRQETFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPREVDRATRKMFIEEVMELVELNSIREALVGLPGETGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGRHCSHLIQYFEAIQGVPKIRDGYNPATWMLEVTSAGTESSLKVNFTNVYRNSELYRRNKQLIQELSIPPQGSKDLHFDITFIGVQNGASVQPIIAVERTVFYRERAAGMYSALPYALAQVIIELPHILVQTLMYGLIVYAMMGFDWTTSKFLWYLFFMYFTFLYYTLYGMMTMAITPNAHVAGILSSAFYAIWSLFSGFIIPLSRIPIWWKWYYWICPVAWTLYGLVASQYGDNRDTLENGQRVEEFVRSYFGFEHDFLGVVAIVVAGFSVLFALIFAFGIKAFNFQKR 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4236g00002 565 SMART AAA_5 75 267 IPR003593 GO:0016887
Mupr4236g00002 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 275 IPR027417 -
Mupr4236g00002 565 Pfam ABC transporter 66 218 IPR003439 GO:0005524
Mupr4236g00002 565 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 17 357 - -
Mupr4236g00002 565 MobiDBLite consensus disorder prediction 1 15 - -
Mupr4236g00002 565 CDD ABCG_PDR_domain2 35 273 IPR034003 -
Mupr4236g00002 565 Pfam ABC-2 type transporter 355 507 IPR013525 GO:0016020|GO:0140359
Mupr4236g00002 565 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 290 IPR003439 GO:0005524
Mupr4236g00002 565 FunFam ABC transporter G family member 40 52 282 - -
Mupr4236g00002 565 Gene3D - 52 287 IPR027417 -
Mupr4236g00002 565 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4236g00002 Mupr-Chr4236 3580 8573 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4236g00002 63 250 Calmodulin-binding Proteins AT2G36910 26.000 2.11e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4236g00002 K08711 - lja:Lj5g3v0540170.1 815.839