Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4223g00004 ATGGTGAGAACCCCGTCATGGGACAAAAGTGGAGTGAGGAAAGGTACTTGGACTCCTGAGGAAGATAGCAAGTTAATTGCTTATATCACTAGGTATGGCTCCTGGAACTGGCGCCAACTTCCCAGGTTTGCAGGTCTTGCAAGGTGTGGGAAAAGTTGTAGATTGAGATGGATGAATTATTTAAGGCCTGATCTCAAAAGAGGGAACTTCACTCCACAAGAAGAAGAATGCATCATCAGAATGCACAAAAAACTTGGTAACAGATGGTCTGCCATTGCGGCTGAGTTACCAGGAAGAACAGATAACGAAATAAAAAACCATTGGCACACCACACTCAAGAAG 342 0.4415 MVRTPSWDKSGVRKGTWTPEEDSKLIAYITRYGSWNWRQLPRFAGLARCGKSCRLRWMNYLRPDLKRGNFTPQEEECIIRMHKKLGNRWSAIAAELPGRTDNEIKNHWHTTLKK 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4223g00004 114 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr4223g00004 114 CDD SANT 69 112 IPR001005 -
Mupr4223g00004 114 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr4223g00004 114 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 114 IPR017930 -
Mupr4223g00004 114 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 114 - -
Mupr4223g00004 114 CDD SANT 16 61 IPR001005 -
Mupr4223g00004 114 SMART sant 13 63 IPR001005 -
Mupr4223g00004 114 SMART sant 66 114 IPR001005 -
Mupr4223g00004 114 Gene3D - 6 66 - -
Mupr4223g00004 114 FunFam MYB-related transcription factor 13 66 - -
Mupr4223g00004 114 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr4223g00004 114 Gene3D - 69 114 - -
Mupr4223g00004 114 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr4223g00004 114 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr4223g00004 114 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4223g00004 Mupr-Chr4223 9736 10328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4223g00004 1 114 MYB Transcription Factor Family AT2G31180 72.807 2.34e-58 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr4223g00004 Myb_DNA-binding 1.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4223g00004 K09422 - gmx:778184 234.572