Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4216g00005 ATGAAGAAAACTCCATCCCCGAATTTGCATCAATCTAGCCAAAGAAAACAGAATGCTAATATCCAACCTCTTAAGAGGCACAATCACAATCCTAATCCTAAGACTCAGTCAGCCCTGAAATCTTTCAAGCAAGCTGTCAAGAAATGTGCAGCTGTTTTTTCATTGATTGTCTCTGGCAAGAGAAAAACATCCTCAAATGTTGTTGGAAATGATGAGAGAAAGAACACATCCAAGGTCAGAGGAGTGGTATCATCATCAACTGATTTATCATCTGAAAGTAACGCCAAGAACTCATCAAAATGGAAGTTTTCTAATTCCTATGCATCATCTAGCACTGCAAGTGGACAACTTGGAATTGGCAACTTCTCCTTTGAAGAAATTTACAAGTCAACTGCAAAATTCTCTCCAGATAATGAAATTGGGCAAGGTGGCTTTGGAACTGTCTACAAGGGAAAGCTTAATGATGGATCTATTGTCGCCGTTAAGCGTGCCAAGAAGGAAGTAATACACAATCACTTGCATGAGTTCAAGAATGAAATATACACCTTGTCACAAATTGAGCATCGGAATCTTGTGAGGTTGCATGGATATTTGGAGCATGGAGAGGAGAAGATTATTGTTGTTGAATATGTTGGTAATGGTAACCTTAGAGAACACCTAGATGGTGTTCGTGGAGATGGTTTAGAAATTGGGCAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAATAACTTATCTTCACATGTACGCAGATAATCCAATTATCCATAGAGACATCAAAGCATCAAACATCCTAATCACTGAGAACCTAAAGGCAAAAGTGGCTGATTTTGGTTTTGCAAGGTTGTCTGATGATCCTACTGCAACTCATATTTCAACTCAAGTTAAAGGAACAGCTGGATACATGGATCCTGAGTATCTTAGAACATATCAACTCACTGAAAAGAGTGATGTTTATTCCTTTGGTGTATTGCTTGTTGAAATGATGACAGGAAGACATCCAATAGAACCAAAGAGACCACTTGACGAGAGAGTGACAATCAGATGGGCAATGAATATGCTGAAACAAGGGGATTCCGTATTTGCCATGGACCCTAGGCTGAGAAGAAATCCAGCCTCCATCAAGGCAGTAAAGAAGGTTCTCAAGCTAGCTCTCCAATGCATTGCACCTTCGAAACAATCAAGGCCACCTATGAAGAATTGTGCAGAGGTTCTGTGGGAGATACGTAAAGGTTTTAGAGATGAAACCAATTCTGATCATCCTTCTCTCCCTTCTCACCATTCTGCGAACTTTCCTCGAAGAGAAAAGAATAAGCATACGGTGTTTGGTATTGAAGATGATGACATCTCCCAACAACAAGACAACCTCTTCATCGGACACCAAGGACACGTAGTAGTCACTGCTCGGCTCGGGGCTGCCGCCGAATTTAGCCGACCGGAGGTCCCAATAGAGCTCAACTTGGTTGCCATCAACCTCAAAGGTTTTGTAACCCTTTTTGCTCCAAAAGTGCCAAGGCTTCACGTCAATCTTGCAGCTATATTGCACTTCACCTCCTACACTATCAACCGTGATGTGCAAGGAATGGTTCATGAGGTGATGACCCTTTGGAGACGCGATGCCAAATTAGTGGAAGGACTCAACGCTGTGGAAGACTCAAAAATTGGTGCTATGACTTATGGTGGTAATGGTGTTGTTGTCATTTCAAGGGAATTTTGTTTGGGTGAGTTTTTGGGCTGA 1740 0.4178 MKKTPSPNLHQSSQRKQNANIQPLKRHNHNPNPKTQSALKSFKQAVKKCAAVFSLIVSGKRKTSSNVVGNDERKNTSKVRGVVSSSTDLSSESNAKNSSKWKFSNSYASSSTASGQLGIGNFSFEEIYKSTAKFSPDNEIGQGGFGTVYKGKLNDGSIVAVKRAKKEVIHNHLHEFKNEIYTLSQIEHRNLVRLHGYLEHGEEKIIVVEYVGNGNLREHLDGVRGDGLEIGQRLDIAIDVAHAITYLHMYADNPIIHRDIKASNILITENLKAKVADFGFARLSDDPTATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMMTGRHPIEPKRPLDERVTIRWAMNMLKQGDSVFAMDPRLRRNPASIKAVKKVLKLALQCIAPSKQSRPPMKNCAEVLWEIRKGFRDETNSDHPSLPSHHSANFPRREKNKHTVFGIEDDDISQQQDNLFIGHQGHVVVTARLGAAAEFSRPEVPIELNLVAINLKGFVTLFAPKVPRLHVNLAAILHFTSYTINRDVQGMVHEVMTLWRRDAKLVEGLNAVEDSKIGAMTYGGNGVVVISREFCLGEFLG 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4216g00005 579 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 98 210 - -
Mupr4216g00005 579 SMART serkin_6 134 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4216g00005 579 Gene3D Transferase(Phosphotransferase) domain 1 211 427 - -
Mupr4216g00005 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Mupr4216g00005 579 MobiDBLite consensus disorder prediction 63 102 - -
Mupr4216g00005 579 SUPERFAMILY Protein kinase-like (PK-like) 110 409 IPR011009 -
Mupr4216g00005 579 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 211 420 - -
Mupr4216g00005 579 Pfam Protein tyrosine and serine/threonine kinase 137 406 IPR001245 GO:0004672|GO:0006468
Mupr4216g00005 579 Gene3D Phosphorylase Kinase; domain 1 92 210 - -
Mupr4216g00005 579 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 104 423 - -
Mupr4216g00005 579 MobiDBLite consensus disorder prediction 1 37 - -
Mupr4216g00005 579 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Mupr4216g00005 579 ProSiteProfiles Protein kinase domain profile. 134 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4216g00005 579 CDD STKc_IRAK 140 409 - -
Mupr4216g00005 579 MobiDBLite consensus disorder prediction 79 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4216g00005 Mupr-Chr4216 37656 43942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4216g00005 106 409 Receptor kinase-like Gene Family AT1G79620 45.338 1.63e-73 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Mupr4216g00005 PK_Tyr_Ser-Thr 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4216g00005 - - gmx:100811511 765.377