Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4209g00004 ATGGATGATGAAGTTGTTCAGCGAGTGTTTCATGAAGGAGGACGCGATTACTTCCAACAACAGCCTTCAACTTCTTCGTCTTCCTCTTCCATCCTCCAATCTCTTCCTCTCCATGTGTCTTTTGATCATGGATATTATTTGTTGGTAAAATCTATTCAAGAACTCCGAGAGAAAAAGGATGGCCTTGTTACGGTTGGCATTGGCGGAGCAAGTGGATCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCCATTATTGGTTGTACTGTTATATCAATGGAGAATTATCGTGATGGAGCTGATGAAGGGAATGATCTGGATTCTATAGATTTTGGTACCCTGATTAAGAATCTTGAGGATTTGACTAAAGGCAATGATACGTTAATCCCAGAGTTTGACTATCAGCAAAAGAGGCGTGTTGGCTATAAAGCAATAAAGAGCACTTCATCTGGGGTGGTAATAGTTGATGGCACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGATATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCCTGCTTTCTAAAGTTCGCTATGACATTGGAGATTCTTGTTCACTGGATTACCTCATAGATAGCATTTTTCCATTATTTAGGAAACATATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTTAAATGCAGAAGCGAGTCATCAGATGGACATTCAGGTTCTGCTTTTCAAGGAAATGAAGCCCAAACAGATAATTTTATCGAAATGTACCTTAGACCACCATCAGCTTGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGAGGCAGTCTGGAATTAGATATTATTTATCGCTTGGTGACCAGAGGATTGTTGACAAGCATTTCATTATCAGGCCTAAAGCTGAATTTGAGGTTGGTCGAATGACATTGGGTGGATTGTTGGCTCTTGGGTACACTGTTGTGGTTAGTTATAAACGTGCATCCACAACTGTCAATAATGGCAAGGTTTCAATGTCTTTTGAAACCATTGATGTTCTTGGTGAGACATTCATGGTGATGAGAGGAACTAATAGAAAGACTGTTGGAACGGAAGCATTAAGGATGGGTATCAATGGACCATGGATTACTAAATCATATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGCCTCAGCACACCACCACTTGTGTCTAATACAACTGAGGCTGGTAGTCAAGAAACAATGATAATTGCACCAAAGCCAATTCGTGTTACTCCTACCCTTGTTACTGGGCTTGAGGATTTATCTCAGCCATGGACTCGATCCCCAACAAAATCTAAAATGGAACCTGTTGTGGCTACATGGCATTTCATATCTTCAGATTCGTCCCAGCCTGACAACTCAGTCCTAGACTTCTCTCATGAAGCAACCACAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCTTGATTCATATGACTTGGATAGGGGATTGCTTTTGGCAGTTCAAGCAATACAAGCATTGTTGGAGAATAAGGGTGTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGAAAGACTAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGATGACTTCAGCGCACTTGATTTATCTTTGCTGTCAAAGAATATTGATGACATAAGAAATGGTCGAAGAACAAAAGTACCTATATTTGACTTGGAAAGTGGTGCTCGGAGTGGTTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGGTTGGAGGTGTTCATTCACATTTGATTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATTTCCCAAAATGAGATCATGATGACAGTGTTTCCTATGTTCCAGCAGCTTATTGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGACTTTGACCCTGTGCTTTCTCCTGAGAGTTCATTATTTGTATTAAAGAGTAACAAAAAAGTAGCATATCAAGAGATTGTTGCAATTCTTGATCCGGCAAATTGTGCAGTT 2124 0.3988 MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGASGSGKTSLAEKVASIIGCTVISMENYRDGADEGNDLDSIDFGTLIKNLEDLTKGNDTLIPEFDYQQKRRVGYKAIKSTSSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESSDGHSGSAFQGNEAQTDNFIEMYLRPPSACEEARINDWIKVRQSGIRYYLSLGDQRIVDKHFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTTVNNGKVSMSFETIDVLGETFMVMRGTNRKTVGTEALRMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTEAGSQETMIIAPKPIRVTPTLVTGLEDLSQPWTRSPTKSKMEPVVATWHFISSDSSQPDNSVLDFSHEATTDPSSFRDSIRLAPMLDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFSALDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGFKELEVSEDCGVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQEIVAILDPANCAV 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4209g00004 708 CDD UMPK_like 64 226 - -
Mupr4209g00004 708 PRINTS Uridine kinase signature 552 563 - -
Mupr4209g00004 708 PRINTS Uridine kinase signature 525 542 - -
Mupr4209g00004 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 511 671 IPR027417 -
Mupr4209g00004 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 176 IPR027417 -
Mupr4209g00004 708 Pfam Phosphoribulokinase / Uridine kinase family 527 631 IPR006083 GO:0005524|GO:0016301
Mupr4209g00004 708 Pfam Phosphoribulokinase / Uridine kinase family 65 223 IPR006083 GO:0005524|GO:0016301
Mupr4209g00004 708 SMART AAA_5 524 664 IPR003593 GO:0016887
Mupr4209g00004 708 SMART AAA_5 61 211 IPR003593 GO:0016887
Mupr4209g00004 708 Gene3D - 63 243 IPR027417 -
Mupr4209g00004 708 Gene3D - 524 680 IPR027417 -
Mupr4209g00004 708 PANTHER URIDINE KINASE 498 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4209g00004 Mupr-Chr4209 31796 46319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4209g00004 64 223 PRT Gene Family AT1G55810 20.670 1.00e-05 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4209g00004 - - gmx:100778905 1275