Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4208g00003 CTATTAAGGTGTGGAAAGAGTTGCAGACTAAGGTGGATTAACTATCTAAGGCCTGATATCAAGAGAGGAAATTTCTCAAGTGAAGAAGAGGAAATTATCATTAAGATGCATGAGTTGCTGGGGAACAGGTGGTCAGCAATCGCAGCAAAATTACCGGGAAGAACTGACAATGAGATAAAAAATGTGTGGCACACCCACTTGAAGAAGAGGCTAGTGATGAATAATTCAGATGCCAAAAGAGTTTCCAAGCCAAAAATCAAACGATCTGATTCCAATTCCAGCACACTAACTACTACATCATCATCAGCATGCACTACTTCTTCCAGTGATCTATCATCATTCAGTGAAGGGACTAAACACATGATGATGGACAACAACAACATCAAAAGTGAAGACATAGAATCTGAGGAGACAACAGTGCCTCCAATTGATGAAAGTTTTTGGTCAGTGGATGAGGAAAGCTCCACCATGGTGCCATCAAATTCTTGGACAATTTCAAATGAATTATCACCCCCTCAATGGCAATTTAACTCGGTGGAAAACTTCCAACACAGTTTTGATTATAATGGTTCAAACTTTGATGATGGCGGCATGGATTTCTGGTATGACATGTTCATCAGATCAGGGGAGTCTATAGAGTTACCAGAGTTC 651 0.4025 LLRCGKSCRLRWINYLRPDIKRGNFSSEEEEIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLVMNNSDAKRVSKPKIKRSDSNSSTLTTTSSSACTTSSSDLSSFSEGTKHMMMDNNNIKSEDIESEETTVPPIDESFWSVDEESSTMVPSNSWTISNELSPPQWQFNSVENFQHSFDYNGSNFDDGGMDFWYDMFIRSGESIELPEF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4208g00003 217 ProSiteProfiles Myb-like domain profile. 17 67 IPR001005 -
Mupr4208g00003 217 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 71 IPR017930 -
Mupr4208g00003 217 Gene3D - 23 101 - -
Mupr4208g00003 217 Gene3D - 2 21 - -
Mupr4208g00003 217 Pfam Myb-like DNA-binding domain 22 67 IPR001005 -
Mupr4208g00003 217 CDD SANT 24 67 IPR001005 -
Mupr4208g00003 217 SMART sant 21 69 IPR001005 -
Mupr4208g00003 217 SUPERFAMILY Homeodomain-like 3 73 IPR009057 -
Mupr4208g00003 217 MobiDBLite consensus disorder prediction 88 119 - -
Mupr4208g00003 217 PANTHER MYB DOMAIN PROTEIN 55 1 177 - -
Mupr4208g00003 217 MobiDBLite consensus disorder prediction 78 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4208g00003 Mupr-Chr4208 29405 31383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4208g00003 1 217 MYB Transcription Factor Family AT2G31180 45.740 7.74e-51 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr4208g00003 Myb_DNA-binding 3.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4208g00003 K09422 - gmx:100794205 319.316