Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4202g00002 ATGTATCACTTGTTAAAAGTACAGAAAGAACGTATACGTGAGAATTACCACCCACCACACACAGGCAGGCAGGCAGGCAGAGCTATGAGTTTTGTTTTTCGAGGAACAAGAGCAGATATTGAAAATGGATTTCCAGGATTTATACCTGAGAGGCGAGCATTGCGCGTTCATACAGCACGTCCTAGTAATTCCAATTCACTCACTTTTCTCGTTACAGTTCTTCTGTTATTCATGATACTGAACTCTCACCAGATGTCCCCAAATTTTCTGCTGTGGCTGGTGCTTGGTGTTTTCTTGATGGCAACAATGTTAAGGATGTATGCAACATGTCAACAACTTCAAGCACAGGCCCAAGCTCATGCAGCTGCAGCCAGTGGCATTCTTGGTCACACAGAACTGAGGCTACATATGCCACCATCAATAGCACTTGCAAGCCGAGGGCGTCTGCAGGGTCTCAGACTTCAGCTTGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCAGATAATGTTTCTACTGCAGCTTCTATGACCGAGGAAGAGATAAATGCTCTTCCTGTCCACAAATACAAGGTTTCTGGTCCTCAAAGTGGTAGTTCCTCAATGCAACAAGCATCGGCTTCCACTTCTGCTGAGAAGAAGCAAGATATTTCAAATGGTGTTGGGAGCATGAAAGCCTCTGACGATGAGCTCACTTGCAGTGTATGCTTGGAGCAAGTTAATGTTGGTGACGTACTGCGTAGCTTACCTTGCTTGCATCAGTTTCACGCTAATTGCATCGATCCCTGGTTGCGCCAACAAGGTACATGTCCTGTATGTAAATTTCGAGCTGGATCTGGGTGGAATGAGAATGGACATAATGATATCGCGGACATGGGATTTGAAGAACGGCAGATACCGTGTAACAACTATACAAGTTATACAATTTGTTTCCCATTCAACTTTCATTTCTGGGCAGCTGTGCTTAACCCAGCAGCATGTACAAAATCACCAGTGGAGCTGTTAATGACCCCTGTCAATTTATGA 1050 0.4429 MYHLLKVQKERIRENYHPPHTGRQAGRAMSFVFRGTRADIENGFPGFIPERRALRVHTARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGILGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAASMTEEEINALPVHKYKVSGPQSGSSSMQQASASTSAEKKQDISNGVGSMKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWNENGHNDIADMGFEERQIPCNNYTSYTICFPFNFHFWAAVLNPAACTKSPVELLMTPVNL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4202g00002 349 SUPERFAMILY RING/U-box 236 285 - -
Mupr4202g00002 349 MobiDBLite consensus disorder prediction 201 230 - -
Mupr4202g00002 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 215 287 IPR013083 -
Mupr4202g00002 349 ProSiteProfiles Zinc finger RING-type profile. 241 282 IPR001841 -
Mupr4202g00002 349 CDD RING-H2_PA-TM-RING 240 282 - -
Mupr4202g00002 349 MobiDBLite consensus disorder prediction 194 234 - -
Mupr4202g00002 349 Pfam Ring finger domain 240 282 IPR001841 -
Mupr4202g00002 349 PANTHER TARGET OF ERK KINASE MPK-1 29 287 - -
Mupr4202g00002 349 SMART ring_2 241 281 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4202g00002 Mupr-Chr4202 26024 31298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4202g00002 29 300 C3H Transcription Factor Family AT3G55530 78.182 5.28e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4202g00002 K16283 - gmx:100777936 448.743