Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr419g00003 ATGGACACGCCAGAGAGGAACCGGATCAACACTCCCATCTCTAAGTTTGAGTTTTTGGTAGCCTGTGAAATGACTTTATCCATGGATTCACCTGTTTTCAACTATATCAATAGTTTGTCTCCTATAAAGCCCGTTAAGTCTGTTCCCGTTAGTCAGACTTTCAATTCACTGAGCTTTTCGTCCCCTCCATCTGTTTTCACATCACCCCATGTTAGTTGTCTCAAGGAATCTAGATTCCTCCGGAGACACAACCCCTTGGGCACATCAAAGCCTAAGGTTTCTCCTGAAGATGTAAATAAAGCTCACTTAAGTGAAGAGACTCTTGCAGATCCTACACGTCCACATCATAACTCAAGTGAATTACAGGAAAACACTGATAAAGGGATTTCAGTAGGAGATGCTTCAATTGAGCTATCTAGCGAGCACATAAAATTCTCAGTTGAGCTACCGAAAGCTTTAGAATATGGTTGTGGTAGCCCTGGCTATGATCCTCCACTTTGTGGTGATGAGGCTAACTCTCTTTTGGATTTGCCTGGCGAGGCAGCATCAGATGTTGGCTATGTTCAGGAAGGCTGTAAAACAGATTCAGTTGAGGGTGAAGTGCATCTTCAGGAAATATGTCAGATGGAGCCAAAGAGTGAAGGTCCAGACTGTTATTGGGATAGTTTAATTCCTGATGCCCCTGATATGCTAATTTTTAGTTCCCCAGGTGAAGCAGAAGCTTTTAAGGGTCTAATGCACAAACCGTTGGACTCTTCTATACGACTGAGCAATTTTATGTCTCTGCTACCACATTCTACCATCAATAATGGTAGGAAAATGCACATTGTTGATTCAGTTGCTTCTGGTTCTGAACATGTAATTGAAGATCATTGTTCTGAGCCAATAATAGCCACAGCCACAGACCAAACACAGGATAATCTTGCCAATGTTGCTTTTGTTACTAGCAATCCAAATGAGAAAGCAAATGACCAGCTTGTTTCTGTCACGCACCGTGCCATACGGAGGCGCTGTCTAGACTTTGAGATGGTCAATGTGCAAAGGAAGAACTTTGAGGATAATTCAAACACCGGTTCTAGTACATCTGTGTCTGATGAGAAGAATGTTGCTAATGAAAAGCAACTGCTTCCTACAAAACGCAATGGGAATTTACAGAGGGGAATTTTGCCAGGAATCGGTCTACACTTGAATGCACTTGCTGCCTTAAAAGATTACAGGGGCATACAAATTGAAAAATTGTCTTCTGGAAGACAACTCAGTCTGCCCAGCTCTACTTCGTTGCATATCTCTACAAGCCAAGAACATCAGCATCTATCACTGGTACCTGTATCATCTGAAAGAGAATTGGATTCATCTGACGATGGGGTTCAGCCTGCTGAAGATTGTTCCCTGCCATCAGCTTACATGGCTGGTGAAGACTTCAATCAGAATAGCCCAAGAAAGAAAAGGCAAGTGCAGCGTAAGTTGGAGACACCTGGAGAAATTGAGGGCTGTAAACGCTGCAATTGCAAGAAATCAAAGTGTTTGAAGCTTTACTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCCTGCTCCTGTCAGGAATGCTTCAACAAACCTATTCATGAAGACACTGTTCTTCAAACTCGCAAGCAGATTGAATCTCGTAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAATTCTGATTCTGTACCTGAAATTGGGGATGATCCAAACAAAACTCCAGCTTCGGCACGACACAAAAGAGGTTGCAACTGCAAAAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAATGCTTTCGGCAGAAAGGATGGTTCTTCTCTTGTAGGCATAGAAACTGAGTCAGAAGAAACAGAAGCATCTGACAAGGGTGTGGCAGAAAAAGCTTCACAGAAAACTGAAATTCAGCACACTGAAGATCATCCAGATTCAGCTACTGAGTCAACACCATTACGTCTTTCCAGGCCATTGCTTCCGTTGCCCTTTTTATCAAAGGGAAAGCCACCAAGATCTTTTGTTACAACCATCTCAGGCTCTGCATTATTTGCCAGCCAAAAGCTTGGGAAACCAAATTCTCTTTGGTCTCAAGCTAAGCATTTTCAAACTGTTCCAGATGATGAAATGCCAGATATTCTGCGAGGTGATACCTCTCCTATCACTTGCATCAAAACTTCTTCTCCAAATGGCAAGAGGATCTCCTCTCCTAACTGTGACTTGGGATCATCTCCTAGTCGCAGAGGTGGCAGGAAGTTGATATTACAATCCATTCCTTCATTTCCTTCTCTCACCCATCAATCATCACCCCTAGAATGA 2376 0.4293 MDTPERNRINTPISKFEFLVACEMTLSMDSPVFNYINSLSPIKPVKSVPVSQTFNSLSFSSPPSVFTSPHVSCLKESRFLRRHNPLGTSKPKVSPEDVNKAHLSEETLADPTRPHHNSSELQENTDKGISVGDASIELSSEHIKFSVELPKALEYGCGSPGYDPPLCGDEANSLLDLPGEAASDVGYVQEGCKTDSVEGEVHLQEICQMEPKSEGPDCYWDSLIPDAPDMLIFSSPGEAEAFKGLMHKPLDSSIRLSNFMSLLPHSTINNGRKMHIVDSVASGSEHVIEDHCSEPIIATATDQTQDNLANVAFVTSNPNEKANDQLVSVTHRAIRRRCLDFEMVNVQRKNFEDNSNTGSSTSVSDEKNVANEKQLLPTKRNGNLQRGILPGIGLHLNALAALKDYRGIQIEKLSSGRQLSLPSSTSLHISTSQEHQHLSLVPVSSERELDSSDDGVQPAEDCSLPSAYMAGEDFNQNSPRKKRQVQRKLETPGEIEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRNSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSSLVGIETESEETEASDKGVAEKASQKTEIQHTEDHPDSATESTPLRLSRPLLPLPFLSKGKPPRSFVTTISGSALFASQKLGKPNSLWSQAKHFQTVPDDEMPDILRGDTSPITCIKTSSPNGKRISSPNCDLGSSPSRRGGRKLILQSIPSFPSLTHQSSPLE 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr419g00003 791 SMART CXC_2 496 537 IPR033467 -
Mupr419g00003 791 SMART CXC_2 582 623 IPR033467 -
Mupr419g00003 791 ProSiteProfiles CRC domain profile. 497 622 IPR005172 -
Mupr419g00003 791 MobiDBLite consensus disorder prediction 632 673 - -
Mupr419g00003 791 MobiDBLite consensus disorder prediction 744 762 - -
Mupr419g00003 791 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 585 620 IPR005172 -
Mupr419g00003 791 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 499 534 IPR005172 -
Mupr419g00003 791 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 786 IPR044522 GO:0003700
Mupr419g00003 791 MobiDBLite consensus disorder prediction 351 378 - -
Mupr419g00003 791 MobiDBLite consensus disorder prediction 105 122 - -
Mupr419g00003 791 MobiDBLite consensus disorder prediction 744 770 - -
Mupr419g00003 791 MobiDBLite consensus disorder prediction 105 127 - -
Mupr419g00003 791 MobiDBLite consensus disorder prediction 637 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr419g00003 Mupr-Chr419 17285 22347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr419g00003 29 786 CPP Transcription Factor Family AT4G14770 45.269 2.22e-159 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mupr419g00003 TCR 2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr419g00003 - - gmx:100815907 1364.36