Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr418g00003 ATGCAGAAACAGAGTCCACAATATCAAAATCAAAAACAAACACTTGCTTATATAATAATAACGTGTAACACAGAGGTGGTGGCACTAAAGATTATCTCTCTATCTATATTTTGCATTGTTGCTTCAATTCTTATGATGGGAAATACCAATGAAAACATCCCTTCCTCGGGATTGGCCTCTTCTTCGTCACCCTTCCCAAATCCGAAACCCCATCCCTTCTCAAATCCAGAACCCCAATGGATACACGATGTATTTATCAATTTCAGGGGAGAAGACACTCGTAGGAATTTCGTTTCTCATCTCCATTATGGCCTCTCAAATGCCGGTGTCAACACTTTCCTTGACGAGGAGAATCTACTCAAGGGAATGCGGCTGGAAGAACTAATGCGAGCAATAGAAGGGTCTCAAATTGCAATAGTTGTTTTCTCCAATACATATACTGAATCTACTTGGTGTCTTCGCGAGCTTGAAAATATCATTAAATGCCACGAAACTTGTGGCCAAAGAGTTGTGCCCGTGTTTTACTATATTGACCCATCCCATGTACGTCATCAGAAGGGTGATTTTGGAAAAGCGTTGAAAGCAGATGTAGAAAAAAGGTTTTCAAGAAAGGATGAGGTATATGCGTTGTCCAGGTGGAGCCGCGCACTCACCAGAGCTACAAATTTCTCTGGTTGGGATGTGAGGAATCATAGGAATGAAGCTGAGCTAGTGAAGGAAATTGTTAACGACATTCTTACCAAACTGGACAACGAAGTCTTGTTTACTACCGAATTTCCTGTCGGATTAGAATCCCGTGTGCAAAAAGTGACTGCATTGATTGAAAATCGATCTACCCAAGTCTGTACGATAGGGATATGGGGAATGGGAGGATCAGGTAAAACTACCACAGCCAAAGCAATCTACAATCAAATTCATCGTAGATTCATAGATAAAAGTTTCATTGAAGATATTAGAGAAGTTTGTCAAACAGATACAAGAGGGTATGTTCGTTTACAAAAAAAACTTCTTTCAGATGTCCTAAAAATAAAGATCAAGTTACATAGCCTTCGGATGGGAAGAACTATGATACAGAACAGACTTGCTGGAAAAAGGGTACTCATTGTACTTGATGATGTGGACGAGTTTAGCCAATTACAAGGCCTATGTGGAAATCGTAAATGGTTTGATCAAGGAAGTATAATAATCATTACAACAAGAGATTTACACCTACTTACCAGACTTAAAGTTGATTATGTTTATGAGATGGATAAAATGGACCAAAATGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTAGAGAAGCAAAACCAAGAGAAGACTTCAATGAACTCGCAAGAAATGTAGTTGCTTATTGTGGAGGACTACCACTAGCTCTTGAAGTACTTGGTTCTTATTTAATAGAGAGGACAACGAGTGAGTGGAGAAGTGTATTGTCAAAACTTGAAACAATTCCCCATTCTAAAGTTTATAGGATATTAAGAATAAGCTTTGACGGTTTATGCGATCAAACGGAAAAGGATATATTTCTTGATGTATGTTGTTTCTTTATTGGTAAAGACAGAGCCTATGTCACACAGATACTAAATCGTTGTGGACTGCATGCCGATATTGGAATAACAGTTCTTATAGAGCGTAGCCTCATAAAAGTTGTGAACAACTAA 1665 0.3862 MQKQSPQYQNQKQTLAYIIITCNTEVVALKIISLSIFCIVASILMMGNTNENIPSSGLASSSSPFPNPKPHPFSNPEPQWIHDVFINFRGEDTRRNFVSHLHYGLSNAGVNTFLDEENLLKGMRLEELMRAIEGSQIAIVVFSNTYTESTWCLRELENIIKCHETCGQRVVPVFYYIDPSHVRHQKGDFGKALKADVEKRFSRKDEVYALSRWSRALTRATNFSGWDVRNHRNEAELVKEIVNDILTKLDNEVLFTTEFPVGLESRVQKVTALIENRSTQVCTIGIWGMGGSGKTTTAKAIYNQIHRRFIDKSFIEDIREVCQTDTRGYVRLQKKLLSDVLKIKIKLHSLRMGRTMIQNRLAGKRVLIVLDDVDEFSQLQGLCGNRKWFDQGSIIIITTRDLHLLTRLKVDYVYEMDKMDQNESLELFSWHAFREAKPREDFNELARNVVAYCGGLPLALEVLGSYLIERTTSEWRSVLSKLETIPHSKVYRILRISFDGLCDQTEKDIFLDVCCFFIGKDRAYVTQILNRCGLHADIGITVLIERSLIKVVNN 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr418g00003 554 SMART till_3 81 223 IPR000157 GO:0007165
Mupr418g00003 554 Pfam NB-ARC domain 268 486 IPR002182 GO:0043531
Mupr418g00003 554 Pfam TIR domain 82 253 IPR000157 GO:0007165
Mupr418g00003 554 PRINTS Disease resistance protein signature 453 467 - -
Mupr418g00003 554 PRINTS Disease resistance protein signature 283 298 - -
Mupr418g00003 554 PRINTS Disease resistance protein signature 360 374 - -
Mupr418g00003 554 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 253 512 IPR027417 -
Mupr418g00003 554 Gene3D - 249 413 IPR027417 -
Mupr418g00003 554 Gene3D - 75 248 IPR035897 -
Mupr418g00003 554 ProSiteProfiles TIR domain profile. 80 249 IPR000157 GO:0007165
Mupr418g00003 554 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 82 551 IPR044974 GO:0006952
Mupr418g00003 554 Gene3D - 418 502 IPR042197 -
Mupr418g00003 554 FunFam Disease resistance protein (TIR-NBS-LRR class) 78 251 - -
Mupr418g00003 554 SUPERFAMILY Toll/Interleukin receptor TIR domain 76 226 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr418g00003 Mupr-Chr418 7033 18354 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr418g00003 74 551 WRKY Transcription Factor Family AT4G12020 28.189 1.69e-47 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr418g00003 - - gmx:100815297 733.406