Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4189g00001 ATGAAACGACCGAGTAATGAATTTGAAGATGAGGTGCTCCCCAATGATCAGAGTGGGGCACGGTTGAGTGATGAGGGTTATGAAGGAAGTGCTGGTGTTGTTCTGAAGAAAGGGCCGTGGACGTCAACTGAAGATGATATTTTGGTGGATTATGTCAAGAAGCATGGGGAGGGAAACTGGAATGCTGTTCAGAAGCACACAGGGCTATTACGATGTGGAAAAAGTTGTCGGCTGCGATGGGCTAATCACCTAAGGCCAAATTTAAAGAAAGGGGCATTTACTGCCGAAGAGGAGCAGTTGATTGCTGAACTTCATGCCACAATGGGAAACAAATGGGCACGCATGGCTGCAAATTTGCCTGGTCGTACAGATAATGAGATAAAGAACTACTGGAACACCCGGATTAAGAGGCGGCAACGGGCTGGGTTGCCACTTTATCCTCCAGAAGTGTGTTTGAAAGCTTTACAAGAGAGTCAGCGTGGCCAAAGCTCTGGTGGGCTTAATGGTGCCAATAAAACGCATCCTGATTTCTTACAGAAAAACAGTTATGAGATACATGATACTATATTTGACAGTGTGAAGGATAATCAGGGAATCTTACCTTACGTGCCTGAGCTTTCTGATATTTCTGTTTATGGCAATATGCTAAAAGGTCTTGATTCTTCTCAGTACTGTAGTTTTGTGCCGCCAACATCACCTAAGCCTAAGCGTCTCAAAGAGTCAACAATGCCATTTATTGATTCCAGTGATATGAACAGAAATGATTTATATCCATTTGATCAATTTCAGGATAATAATTCTGATAAGATTGCACAATCATTTGGAATGCAAATACCCCTTGATCCTGGTTGTTCCTCGCACAGCTCAATTTGTTATAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCTTATGAGGCTGTGAAGTCGGAGCTCCCTTCACTCCAATATCCAGAACTTGATTTAAGTAGTTGGGGTACATCTCCCCCACCTCCTTTGCTTGAGTCAATTGATGATTTCATTCAGTCTCCTACACCAATTAGTACACTAGAGTCAGATTGTTCTTCTCCACCAAATAGTGGCCTGCTGGATGCTTTACTTTATCAGGCTAAGACTCTGAACAGTTCAAAGAACCATTATTCTGACAAGAGTTCAAATTCTTCTATTGTAAACCCTGGTGACAGAGCGGACAGCTCTGCTTTAAACCTGTACGAGACAGACTGGGAAGACTATTCCGACCCTGTATCTCCATTTGGTGCAACTTCAATACTGAATGAGTGCTCGGCTCTCAGTGCCAATGCGAATTCATTGGACGAACAGCTATCCGTTCCCACCTTTAATGGCAACATTCTGAATTTAGAGTCTGATGACAAGGTTTGTACTCCTAATAGTGAAAATCTAACCTTGTCCATGTTGAATGTTACGCGTCCAGACTTCTTGCTTGCTTCAGATTGGCATGACGTGGGTTCTGCTCATGGCAAGAACCAAGCCTTCACCACTGATGCTACAACGACCCTTCTTGGAGATGATTTAGCCACTGACCATCAGCATGTGACTGCTGGAACTTCCAAGTCAAGTCAAGTGTGGGGGTTTGGTTCTTGTACAACTGCAATGATTGATTTAGAAAACCTCAATTAG 1644 0.4325 MKRPSNEFEDEVLPNDQSGARLSDEGYEGSAGVVLKKGPWTSTEDDILVDYVKKHGEGNWNAVQKHTGLLRCGKSCRLRWANHLRPNLKKGAFTAEEEQLIAELHATMGNKWARMAANLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCLKALQESQRGQSSGGLNGANKTHPDFLQKNSYEIHDTIFDSVKDNQGILPYVPELSDISVYGNMLKGLDSSQYCSFVPPTSPKPKRLKESTMPFIDSSDMNRNDLYPFDQFQDNNSDKIAQSFGMQIPLDPGCSSHSSICYSHSLSNGNSSTSKPYEAVKSELPSLQYPELDLSSWGTSPPPPLLESIDDFIQSPTPISTLESDCSSPPNSGLLDALLYQAKTLNSSKNHYSDKSSNSSIVNPGDRADSSALNLYETDWEDYSDPVSPFGATSILNECSALSANANSLDEQLSVPTFNGNILNLESDDKVCTPNSENLTLSMLNVTRPDFLLASDWHDVGSAHGKNQAFTTDATTTLLGDDLATDHQHVTAGTSKSSQVWGFGSCTTAMIDLENLN 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4189g00001 547 SMART sant 36 86 IPR001005 -
Mupr4189g00001 547 SMART sant 89 137 IPR001005 -
Mupr4189g00001 547 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 84 IPR017930 -
Mupr4189g00001 547 FunFam MYB-related transcription factor 36 89 - -
Mupr4189g00001 547 FunFam Transcription factor GAMYB 92 138 - -
Mupr4189g00001 547 ProSiteProfiles Myb-like domain profile. 35 84 IPR001005 -
Mupr4189g00001 547 CDD SANT 39 84 IPR001005 -
Mupr4189g00001 547 CDD SANT 92 133 IPR001005 -
Mupr4189g00001 547 MobiDBLite consensus disorder prediction 1 26 - -
Mupr4189g00001 547 SUPERFAMILY Homeodomain-like 36 131 IPR009057 -
Mupr4189g00001 547 Gene3D - 92 138 - -
Mupr4189g00001 547 Gene3D - 36 89 - -
Mupr4189g00001 547 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 15 503 - -
Mupr4189g00001 547 Pfam Myb-like DNA-binding domain 90 133 IPR001005 -
Mupr4189g00001 547 Pfam Myb-like DNA-binding domain 37 84 IPR001005 -
Mupr4189g00001 547 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 139 IPR017930 -
Mupr4189g00001 547 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4189g00001 Mupr-Chr4189 9259 12761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4189g00001 32 537 MYB Transcription Factor Family AT5G06100 43.714 2.89e-123 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr4189g00001 Myb_DNA-binding 9.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4189g00001 K09422 - gmx:100810415 883.634