Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4187g00011 CTCTCGCTTAGCAAATCAGAGCCACAAGGAGCTTTTTACGTACTTTTGCCCAACGAACTGTTTTATTTGCCCAACAATAGGATCCACAACGAGTTTTTTTCTCTCTATTCCCCTGTCTTGCTCGGCGAGATCCTCGCTCGGGTCACTAGCACCGCATCCCACCATCAGTATCAGTTCAATGCTCTATCTTTGAGAGCCACTAGCACCGCATCCCACTTCTTTGAAGTTTCCACTCCATTTATCTTGAAATATTGCTCCACTCTATTAATCCACCCCGATGCATTGTCCTTCAAGAAGATCAAAATATCTAGTTACTTTCCACCATTATCTTGCTCTGGAGGGCGACTTCCATGTGACGAACCTCTTCAATCTTTGATCAGTGACCTTCGTGGATCTACATCTTGTATGCCTGGATCAGATGCAGATCATCAGCAAAATGTAATGTGTTCCTACAGGCATTGGTCAAAGGCTGAAACAAAGCATTTAGAATATGTGATTGAATTCCCTTCTTCATTTGAAATTTCAAGACCTCGAAAACGTAGAAGAAAGGACTCTGTTCAAAATGAAAAGCGTGCCAGTGTAAAATTCCTAGAGATGGACTCACCAGAAGGCATGCAGAATGGATTTCTACAAAAAGATGATGATATCCTGTCCTGCAAAGGGGAGAATGTATCTAGAACATCCTATAATGAGAAGATTTTTCCTAGTGGAAGAAATGATGGAGGAAAATTTGGTCCTAATCATCCTGGCACCACGGATGACCTGGAGCATGTTGAATCCAGTTTCAACATTCCAGGTGTTTCAATTGCTATGCCCCAATCTTCTGGGGACCCTGAATGTAGTAAATCAGTATATAAAAGTGATCCTGCTCTGCCTGCTAAAACAAAGAAGCTAAGCATGGATCGATCTGACTCAAGAAACCGAATGCTTCTGCAGAAGAGACAGTTCTTTCATTCACACAGAGTCCAGCCTATGGCACTAGAACAAGTGTTATCAGACCGTGATAGTGAAGACGAAGTTGATGATGACATTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAACAGCTCATGCATCTCTGGAACTCTTTTATGAGGAAGCAAAGGGTACTGGCTGATGGCCATGTTGCGTGGGCCTGTGAGGCATTTTCCAAGCTTCATGGAAAAGAGCTGATCTCATCTCCAGCATTATTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCATGGTCTTCTTGATGCCTGCACAATGAACAACTGTAGCATTATATTAGATAATTACAGAAACGAGGGATTGGACACTGGCAAAAATTAA 1347 0.4195 LSLSKSEPQGAFYVLLPNELFYLPNNRIHNEFFSLYSPVLLGEILARVTSTASHHQYQFNALSLRATSTASHFFEVSTPFILKYCSTLLIHPDALSFKKIKISSYFPPLSCSGGRLPCDEPLQSLISDLRGSTSCMPGSDADHQQNVMCSYRHWSKAETKHLEYVIEFPSSFEISRPRKRRRKDSVQNEKRASVKFLEMDSPEGMQNGFLQKDDDILSCKGENVSRTSYNEKIFPSGRNDGGKFGPNHPGTTDDLEHVESSFNIPGVSIAMPQSSGDPECSKSVYKSDPALPAKTKKLSMDRSDSRNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVAWACEAFSKLHGKELISSPALFWCWRLFMIKLWNHGLLDACTMNNCSIILDNYRNEGLDTGKN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4187g00011 448 PANTHER POLYCOMB GROUP PROTEIN 174 441 - -
Mupr4187g00011 448 Pfam VEFS-Box of polycomb protein 298 433 IPR019135 -
Mupr4187g00011 448 CDD VEFS-box_EMF2-like 311 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4187g00011 Mupr-Chr4187 18825 28516 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4187g00011 175 439 C2H2 Transcription Factor Family AT4G16845 52.788 1.74e-76 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4187g00011 - - gmx:100807112 497.278