Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4183g00002 ATGGCTCGTGCGAATAACTGGCTATCGTTTTCACTCTCGCCCATGGAAATGCTCCGAACCTCCGAACCGCAGTTCGTTCAATACGACGCCGCTTCCGCTACTTCCTCTCACCACTACTTCCTCGATAACTTGTACACCAACGGATGGGGAAACGGAAACCCCAAGTCTCACGTGATGTTCGAGCAGAATCTGAACCGTAGCGACGTGAGCTTCGTGGAATCGTCGCAGACCGTGAGCCACGCGCCGCCTCCCAAGCTAGAGGACTTTCTCGGCGACTCTTCCGCCGTGATGCGTTACTCCGATAGCCAAACGGAGACGCAGGACTCGTCGTTAACTCACATGTACGACCACCATGGTTCTGCGTACTTCGGCGACCAGCAGGATCTTAAGGCCATTGCTGGATTTCAAGCTTTTTCGACTAACTCTGGCTCCGAGGTTGACGACTCTGCATCCATCGGAAAAGCGCAACCCACTGAGTTCGGGACTCACTCTATCGAGTCCTCCGGGAACGAGTTCGCCGCGTTCTCCGGTGCCGGCTCCGCCGCCACCGGGACTTTGTCGCTCGCCGTCGCGCAGAGTTCCGAGAAGGCCGTCGTCGCGGCGGATTCCGGTAGCTCGAAGAAGATCGTTGATACCTTCGGCCAGCGGACTTCTATTTACAGAGGTGTCACTAGGCACCGATGGACAGGTAGATATGAAGCGCATCTATGGGACAACAGTTGCAGAAGGGAGGGTCAAGCCAGGAAGGGGCGTCAAGGGAAAGCTGCGTTTGACCACATCACCCATCACTCTCCTATATTGAAATTTGTACTTGCTTACATTGAGGTGGTGGAGCGTCCACTGTTGCCGCCTGAAAGTAAATTGTCGTGGTTATCAGGTGGATATGATAAGGAAGAAAAGGCCGCAAGAGCTTATGATTTGGCAGCTCTAAAGTACTGGGGTCCCACCGCTACCACCAACTTCCCTGTTTCCAATTATACGAAGGAAGTGGAGGAGATGAAACATGTAACAAAGCAAGAATTTATAGCATCATTGCGAAGGAAAAGTAGTGGTTTTTCGAGGGGAGCTTCCATATACAGAGGTGTCACAAGGCATCACCAACAGGGTAGGTGGCAAGCAAGAATTGGCCGTGTAGCTGGAAACAAGGACCTCTACTTGGGAACATTCGTTCACATGGTAACAGCAACCGAAGAGGAAGCAGCAGAGGCATACGATATTGCAGCCATAAAGTTCAGAGGTGCAAATGCTGTCACCAATTTTGAGATGAACAGATATGATGTGGAAGCCATAATGAAGAGTTCTCTTCCAGTGGGTGGGGCAGCAAAGCGCTTGAAGCTTTCCCTGGAATCAGAGCAGAAAGGTCCTGTGAGCAGCAGCAGTAGTCAGCAGAATCCACAGTGTGCAAACGTGAGTGGCAACATCAATTTCTCAGCCATTCATCATCAGCCAATTGCCTCTATCCCTTGTGGAATTCCGTTTGATTCTACAGCAGCATATTATCATCACAACCTTTTCCAACATTTTCATCCTACCAACAACGCTGGCACAACAGCTTCTGCTGTTAATGTTACTTCCGCCAATGCAACTGGACTCACTGCACTGCCACCACCAGCACCAGCTGATTTCTTTATTTGGCCTCATCAGTCCTATTGA 1653 0.5088 MARANNWLSFSLSPMEMLRTSEPQFVQYDAASATSSHHYFLDNLYTNGWGNGNPKSHVMFEQNLNRSDVSFVESSQTVSHAPPPKLEDFLGDSSAVMRYSDSQTETQDSSLTHMYDHHGSAYFGDQQDLKAIAGFQAFSTNSGSEVDDSASIGKAQPTEFGTHSIESSGNEFAAFSGAGSAATGTLSLAVAQSSEKAVVAADSGSSKKIVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGKAAFDHITHHSPILKFVLAYIEVVERPLLPPESKLSWLSGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYTKEVEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFVHMVTATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIMKSSLPVGGAAKRLKLSLESEQKGPVSSSSSQQNPQCANVSGNINFSAIHHQPIASIPCGIPFDSTAAYYHHNLFQHFHPTNNAGTTASAVNVTSANATGLTALPPPAPADFFIWPHQSY 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4183g00002 550 SUPERFAMILY DNA-binding domain 357 422 IPR016177 GO:0003677
Mupr4183g00002 550 Gene3D AP2/ERF domain 358 423 IPR036955 GO:0003700|GO:0006355
Mupr4183g00002 550 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 78 463 - -
Mupr4183g00002 550 Pfam AP2 domain 358 413 IPR001471 GO:0003700|GO:0006355
Mupr4183g00002 550 SUPERFAMILY DNA-binding domain 289 324 IPR016177 GO:0003677
Mupr4183g00002 550 CDD AP2 218 324 IPR001471 GO:0003700|GO:0006355
Mupr4183g00002 550 Gene3D AP2/ERF domain 219 324 IPR036955 GO:0003700|GO:0006355
Mupr4183g00002 550 CDD AP2 357 421 IPR001471 GO:0003700|GO:0006355
Mupr4183g00002 550 ProSiteProfiles AP2/ERF domain profile. 219 322 IPR001471 GO:0003700|GO:0006355
Mupr4183g00002 550 SMART rav1_2 358 427 IPR001471 GO:0003700|GO:0006355
Mupr4183g00002 550 SMART rav1_2 219 328 IPR001471 GO:0003700|GO:0006355
Mupr4183g00002 550 PRINTS Ethylene responsive element binding protein signature 304 324 IPR001471 GO:0003700|GO:0006355
Mupr4183g00002 550 PRINTS Ethylene responsive element binding protein signature 220 231 IPR001471 GO:0003700|GO:0006355
Mupr4183g00002 550 ProSiteProfiles AP2/ERF domain profile. 358 421 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4183g00002 Mupr-Chr4183 8097 12619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4183g00002 39 550 AP2-EREBP Transcription Factor Family AT5G10510 50.503 5.38e-164 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr4183g00002 AP2 6.4e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4183g00002 K09285 - gmx:100777168 799.275