Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4181g00001 ATGGTGAAGCCAGAGAACAAGATCCACACAGAGGCATCATCAAAGCCAATAATGAGAGAAACATCTTCATCATCATCACCAGCAGCATCAAGTGACAACAACAACAAGAAGAAGAAGTACAAGGGAGTGAGAATGAGAAGCTGGGGGTCATGGGTGTCAGAGATTAGAGCACCAAACCAGAAAACAAGAATATGGTTGGGATCTTACTCAACTGCAGAGGCAGCAGCCAGAGCCTATGATGCTGCACTTCTATGCCTCAAAGGCTCCTCAGCCAATCTCAACTTCCCTTCAAGTTCCTCAAACTACATCCCTCAAGACACTGCCATGTGCCCAAAATCAATCCAAAGAGTGGCTGCAGCTGCTGCTAATAGTTATATGGACAATGATGCTAATGCTAGTGCTAATGTTATTGCTATTGCTACCACCCCACCTTCCCCTCCTCTTGCTTCAACAACCTCTTCTTCTTCATTGGTCTCATCACCATCATTTGCATCATCATCTCCCTCTGATCAAATCGATGATGATGTCTCACTTCTTTCACCATTTGGGGCCTACTCTACCACTGCTAGCTGTGATCAAGCAAATGAATCAATGGCTATGATGGAATCTTGGTATGGCTTGGAGGGCTTGCAATCCCCCAAATATGTTGATCAAATGCTAAGTGGGGCATTCTTTGACATTGATTCAACACAGTTGCTTGATGATCTGTATGAAGAAAGTGACATCCTTTATAAATGGAGGAGGGGAAATATATAA 756 0.4378 MVKPENKIHTEASSKPIMRETSSSSSPAASSDNNNKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSNYIPQDTAMCPKSIQRVAAAAANSYMDNDANASANVIAIATTPPSPPLASTTSSSSLVSSPSFASSSPSDQIDDDVSLLSPFGAYSTTASCDQANESMAMMESWYGLEGLQSPKYVDQMLSGAFFDIDSTQLLDDLYEESDILYKWRRGNI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4181g00001 251 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Mupr4181g00001 251 FunFam ethylene-responsive transcription factor ERF014-like 38 98 - -
Mupr4181g00001 251 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Mupr4181g00001 251 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Mupr4181g00001 251 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Mupr4181g00001 251 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Mupr4181g00001 251 MobiDBLite consensus disorder prediction 1 43 - -
Mupr4181g00001 251 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Mupr4181g00001 251 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Mupr4181g00001 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 22 184 - -
Mupr4181g00001 251 MobiDBLite consensus disorder prediction 148 171 - -
Mupr4181g00001 251 MobiDBLite consensus disorder prediction 15 33 - -
Mupr4181g00001 251 CDD AP2 42 98 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4181g00001 Mupr-Chr4181 8734 9753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4181g00001 1 125 AP2-EREBP Transcription Factor Family AT1G21910 62.411 9.14e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr4181g00001 AP2 5.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4181g00001 - - gmx:100813313 302.753