Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4180g00007 ATGTCAGAATCAAACGCAATTGCAAATGGTTTGGCTGGTGCAGGTGGTGGAATTATTGCTCAAATAATAACTTATCCTCTTCAAACGGTAAACACGCGCCAGCAAACTGAGAGAACACTCAAAAGGAACAAGCAAAGTTTGCTTCTTCAGTCCTCCAACTCAACCACTGCTCGTGGCACTCTTCTTCAGATCTTTCAGGTCATTGGAAGTGAGGGTTGGGGTGGACTCTATAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGCATTTACTACTATTTCTATCAAGTTTTCAAGAACAAGGCTGTGGCCATTGCAGCTGCGCGGAAAGTAAAAGGGCGTGGAGATGGTACTGTTGGGATGTTTGGTTGGCTTGTTGTGGCTGCAATGGCTGGGTCCTTGAATGTGTTGCTGACAAACCCAATTTGGGTTTTAGTGACTCGGATGCAGACTCATACTCAAGCAGAAAGGAAAATCATGGAGGAAAAGAAAGCTGCTTTAAGGAAGGATGCTTCTGAAAGCACCATCTCAAGCTCAACATTACAAGACAAATTGGCTGAACTGAATTCTAGAAAACCTCGGCCATATGGAACTATACATGCAGCTAATGAAGTCTTCAATGAAGCGGGTGCAGTTGGATTTTGGAAGGGTGTCATCCCTGCCCTTATTATGGTATGCAATCCATCAATTCAGTTTATGATTTATGAGAGCTCATTAAAGCATCTAAGGGCAAAACGCGCTGCTAAGAAGCAAGGGAATACAAGTATATCTGCTTTGGAGGTCTTTTTGGTGGGAGCAATAGCAAAACTTGGAGCCACTGTCTCTACATATCCATTACTAGTTGTCAAGTCGAGGCTTCAAGCAAAACAGGAGATTGGTGGAAGTAGCTCATTAAGATACTCAGGTACTTTTGATGCGGTGCTTAAAATGATCCGTTATGAAGGGTTACCTGGCTTTTATAAGGGCATGAGCACAAAGATTGTACAGAGCGTTTTTGCAGCTTCTGTTCTGTTCATGATTAAGGAGGAGCTTGTTAAGGCTTTTATGGTTCTGGCAAATAAGAGCAAAAATGTTGTTTCAAATTTGAGTAGTTGA 1104 0.4293 MSESNAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKRNKQSLLLQSSNSTTARGTLLQIFQVIGSEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKVKGRGDGTVGMFGWLVVAAMAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEEKKAALRKDASESTISSSTLQDKLAELNSRKPRPYGTIHAANEVFNEAGAVGFWKGVIPALIMVCNPSIQFMIYESSLKHLRAKRAAKKQGNTSISALEVFLVGAIAKLGATVSTYPLLVVKSRLQAKQEIGGSSSLRYSGTFDAVLKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMIKEELVKAFMVLANKSKNVVSNLSS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4180g00007 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 244 IPR018108 -
Mupr4180g00007 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 104 IPR018108 -
Mupr4180g00007 367 Pfam Mitochondrial carrier protein 259 352 IPR018108 -
Mupr4180g00007 367 Pfam Mitochondrial carrier protein 4 103 IPR018108 -
Mupr4180g00007 367 Pfam Mitochondrial carrier protein 122 246 IPR018108 -
Mupr4180g00007 367 Gene3D Mitochondrial carrier domain 174 367 IPR023395 -
Mupr4180g00007 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 259 350 IPR018108 -
Mupr4180g00007 367 SUPERFAMILY Mitochondrial carrier 5 346 IPR023395 -
Mupr4180g00007 367 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 356 IPR044712 GO:0006862|GO:0055085
Mupr4180g00007 367 Gene3D Mitochondrial carrier domain 1 173 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4180g00007 Mupr-Chr4180 17814 22819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4180g00007 26 360 Chloroplast and Mitochondria Gene Families AT1G25380 25.513 1.42e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4180g00007 K13354 - gmx:100777898 585.104