Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr417g00001 ATGGTTTTGAGTAGCAACGGCAGTGAAGAGAGTGAGCTGTATCACGCTCAAATCCATTTGTACAAACATGTGTACAACTTCGTGAGCTCCATGGCTCTTAAGTCTGCTATGGAACTAGGCATAGCAGACGTAATCCACAGCCACGGAAAAGCCATGACCCTTTCCGAGCTATCCTCAGCCCTAAACCTCCATCCCACAAAAGTTGGTATCCTCCACCGCTTCATGCGCCTTCTAACACACAACGGCTTCTTTACCAAAACGACACAGAACGGTAAAGAAGGAGAAGAAGAAATAGCGTATGATCTGACCCCTCCTTCCAAGCTTCTAATAAGAAGCAAGTCAACATGTTTGGCACCTGTTGTTAAGGGAGCGCTTCATTCAAGCTCGCTTGACATGTGGCACTCCTCCAAGAAATGGTTCACGGAGGATAACGAACTCACGCTGTACCAGAGCGCAACAGGGGAGAGCTTCTGGGACTTTCTCAACAAAACCACTGAATCTGAAACGCTGGGCATGTTTCAAGATGCCATGGCAGCGGATTCTCAGATGTTCAAACTGGCTCTCAATGAATGCAAACACGTGTTCCAGGGATTGGGTTCCCTTGTCGATGTGGGGGGTGGGACTGGTGTTGTCACTAGGCTCATCCATGAAGCCTTCCCTCACCTGAAATGCACAGTCTTTGACCAACCACAGGTCGTGGCTAACTTGACCGGAAACGAAAATTTGAACTTTGTCGGTGGAGATATGTTCAAATCCATCCCCTCTGCCGATGCAGTTTTACTCAAGTGGGTTTTGCATGATTGGAACGATGAGCTCTCCGTGAAGATATTGAAGAACTGCAAAGAAGCTATTTCAGGGAAAGGGAAAGGGAAAGAAGGAAAGGTGATAATTATAGACATAGCAATTGATGAAACAAGTGATGACCGTGAATTGACTGAGTTGAAGCTGGACTATGACTTGGTCATGCTGACTATGTTCAATGGAAAAGAGAGAGAAAAGAAGGAGTGGGAGAAAATCATATACGAGGCAGGGTTCAGCAGCTACAAGATTACCCCCATATGTGGCTTCAAATCTCTCATCGAAGTTTATCCTTAA 1095 0.4612 MVLSSNGSEESELYHAQIHLYKHVYNFVSSMALKSAMELGIADVIHSHGKAMTLSELSSALNLHPTKVGILHRFMRLLTHNGFFTKTTQNGKEGEEEIAYDLTPPSKLLIRSKSTCLAPVVKGALHSSSLDMWHSSKKWFTEDNELTLYQSATGESFWDFLNKTTESETLGMFQDAMAADSQMFKLALNECKHVFQGLGSLVDVGGGTGVVTRLIHEAFPHLKCTVFDQPQVVANLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDELSVKILKNCKEAISGKGKGKEGKVIIIDIAIDETSDDRELTELKLDYDLVMLTMFNGKEREKKEWEKIIYEAGFSSYKITPICGFKSLIEVYP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr417g00001 364 Gene3D Vaccinia Virus protein VP39 111 364 IPR029063 -
Mupr417g00001 364 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Mupr417g00001 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 363 IPR029063 -
Mupr417g00001 364 FunFam O-methyltransferase ZRP4 112 364 - -
Mupr417g00001 364 Pfam O-methyltransferase domain 133 346 IPR001077 GO:0008171
Mupr417g00001 364 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Mupr417g00001 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 364 IPR016461 GO:0008168
Mupr417g00001 364 FunFam Coniferyl alcohol 9-O-methyltransferase 4 109 - -
Mupr417g00001 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Mupr417g00001 364 Gene3D - 2 109 IPR036388 -
Mupr417g00001 364 PANTHER O-METHYLTRANSFERASE 15 349 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr417g00001 Mupr-Chr417 1055 2661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr417g00001 28 351 Monolignol Biosynthesis Gene Families AT5G54160 32.317 1.88e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr417g00001 K22588 - gmx:106795493 623.239