Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4171g00001 ATGGATAGTAAGTTCAGGAGCAACCGCAATTCATATATCAATGAACAAGAAGACACTGATGTAGCTCAAGAAAACATTGCCGAGTCCTCTCCTTCTTCCACTGCTTTCAACATCGATGGCTTAGTCCCCTCCCCCACTTCTTCATCAAAGAGAAGGAGAGCCATACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAGAACAACACTCCACCCTCGGATTCGTGGGCATGGAGAAAGTACGGCCAGAAACCCATCAAGGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCGAAGGGGTGTCCGGCACGGAAACAAGTGGAAAGGAGCTGTGTGGACCCCACAATGTTAGTCGTCACTTACTCCTCCGACCACAATCATCCATGGCCAGTTTCTAGAAACCATGCCAGGCCCACAAAGAAACCCGAACCGGAAGTGGCTGCAGACCCGGTCGAACTAGAGGCGGAGCCCGAACCGGAGGAGAAATTCGCAGACCTGGGCGGGGACGACTCCATGGTAACCACCACGGACGAGTTGGGGTGGCTGGGGGAGATGGAAGCTACGTCGTCCACGGTTCTTGAAAGCCCGATTATGGCCGCGGGGTACGCTGCTGACGTGGCGTTCTTGCCTATGAGGGAAGAGGACGAATCGCTCTTCGCCGACCTCGGCGAGCTGCCGGAGTGCTCGGTGGTCTTCCGGCACGGCCTACTGGCGGAGAGGCGGCGGTACACGGCGCCCTGGTGTGGGACCACGACTTGA 792 0.5581 MDSKFRSNRNSYINEQEDTDVAQENIAESSPSSTAFNIDGLVPSPTSSSKRRRAIQKRVVQIPIKETEGCRLKGENNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPVSRNHARPTKKPEPEVAADPVELEAEPEPEEKFADLGGDDSMVTTTDELGWLGEMEATSSTVLESPIMAAGYAADVAFLPMREEDESLFADLGELPECSVVFRHGLLAERRRYTAPWCGTTT 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4171g00001 263 SUPERFAMILY WRKY DNA-binding domain 77 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr4171g00001 263 Gene3D WRKY domain 69 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr4171g00001 263 SMART WRKY_cls 80 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr4171g00001 263 MobiDBLite consensus disorder prediction 140 181 - -
Mupr4171g00001 263 ProSiteProfiles WRKY domain profile. 81 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr4171g00001 263 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 23 241 IPR044810 GO:0003700
Mupr4171g00001 263 MobiDBLite consensus disorder prediction 1 50 - -
Mupr4171g00001 263 FunFam WRKY transcription factor 65 57 141 - -
Mupr4171g00001 263 MobiDBLite consensus disorder prediction 1 55 - -
Mupr4171g00001 263 Pfam WRKY DNA -binding domain 82 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4171g00001 Mupr-Chr4171 11848 13255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4171g00001 18 245 WRKY Transcription Factor Family AT1G29280 58.650 2.73e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr4171g00001 WRKY 5.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4171g00001 - - gmx:100127392 457.988