Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4150g00003 ATGACGAGCGCTTCAGAGCTATTCCACACCAGAAGGCATCGATTGGGACGAAACGCTCTCGATCTAGGGTTCGACACAGAGCTCCACGCCTCCGATTCTCTCCGCCGCCACTACAATGTTCGCCGCCTCCGTCACCACCCGGAGCGTGCATCTGATAGAATTGAAGGGAGGCATCGCCGGTCTGCCTTAAGCGACGGCGTTGATTCCGAAGAAAATGTTAGAGGTACTATTAGAGGGAGTGCCAGTGAGAGACTACCCGTAGGTGTGATTCTTGCACGAGCAAGACTCCTTCAGAGGTTGAGAGGAGAACCTGTATCTACAAACAGGCAATATGGTAGAGATTCAGTGGGTGAGGATCCAACTGGGGCCTCTGTAGTTACTGACTTGACTTCACAAATGGGAAGGTCCCAGCTCCTAAACAACAAGCCTCCTGGACTTACTCAGGAAGCCTTGGACTGTTTGCATCAGGAAGTTTTTAGAAGCAGCAAGATAGGATTGGAGTCCAGGGCACTGCAGGATTGTGGTATATGCTTGGAATCTTTCACAGATGGAGATGAGCTTATACGCTTGCCATGTGGACATAAATTTCACTCTCTTTGCTTGGATCCTTGGATTCGCTGCTGCGGAGACTGTCCATACTGTCGAAGATGTATAGTTGTAAATACTACTCACTTACCACAAGAGGATGCGTAG 693 0.4964 MTSASELFHTRRHRLGRNALDLGFDTELHASDSLRRHYNVRRLRHHPERASDRIEGRHRRSALSDGVDSEENVRGTIRGSASERLPVGVILARARLLQRLRGEPVSTNRQYGRDSVGEDPTGASVVTDLTSQMGRSQLLNNKPPGLTQEALDCLHQEVFRSSKIGLESRALQDCGICLESFTDGDELIRLPCGHKFHSLCLDPWIRCCGDCPYCRRCIVVNTTHLPQEDA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4150g00003 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 219 IPR013083 -
Mupr4150g00003 230 SUPERFAMILY RING/U-box 173 223 - -
Mupr4150g00003 230 SMART ring_2 174 214 IPR001841 -
Mupr4150g00003 230 Pfam Ring finger domain 173 215 IPR001841 -
Mupr4150g00003 230 MobiDBLite consensus disorder prediction 49 67 - -
Mupr4150g00003 230 PANTHER SI:CH211-59O9.10 32 220 - -
Mupr4150g00003 230 CDD RING-H2_PA-TM-RING 173 215 - -
Mupr4150g00003 230 ProSiteProfiles Zinc finger RING-type profile. 174 215 IPR001841 -
Mupr4150g00003 230 MobiDBLite consensus disorder prediction 49 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4150g00003 Mupr-Chr4150 33543 35580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4150g00003 1 219 C3H Transcription Factor Family AT1G49850 38.760 6.27e-42 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4150g00003 - - gmx:548042 367.466