Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4147g00001 ATGCCGGTTGATTTGGACAACGCTTCCACAGCTTCGGGGGACGCCAGCGTCTCTTCCTCAGGCAATCCCACCACCAAGAAAAAACGAAACCTCCCTGGCATGCCAGATCCGGAGGCAGAGGTGATTGCTCTGTCGCCGAAGACTCTACTGGCGACGAACCGGTTCGTGTGCGAGATATGCAAGAAAGGGTTTCAGAGGGACCAGAATCTGCAGCTTCACCGACGGGGTCACAACTTGCCATGGAAGCTGCGGCAGAGGTCGAGCAAGGAGGTGAAGAAGAGAGTGTACGTGTGTCCTGAGGCCACGTGCGTGCACCACGACCCTTCTAGAGCCTTGGGGGACCTGACGGGGATCAAGAAGCACTTCTGCAGGAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAGAAGTACGCTGTTCAGTCCGATTGGAAGGCGCACTCTAAGGTTTGCGGCACCAGGGAGTATAAGTGCGATTGCGGAACTGTGTTTTCCAGGAGGGATAGCTTCATCACGCATAGAGCGTTTTGCGATGCGTTGGCGGAGGAGAGTTCCAGATCTCACACGGTTGTCAAGGCTAATTCGGATAATGATTCCAAGGTTTTAACTGCTGAGTCGCCGCCGCCGCCGCAGTCAAACTTAGTTCATTATAATAATGTTGTTGCTGCTTTGCTTTTCTTTATTTTAGTTTCTGGTGTTTCAGAGTTGCCAGAAAATAATCCCCCACAAGTCATAGAGGAGCCACCTCAAGCTGCTGCTGCTGCTGCTTTAAGTGGGAGCTGTGGCAGCAACAGCAGCAGCACTTGTTCAACAAGCAATGGTGCTGCTGCTGCTGCTACTACTAGTAGCAATAGTGTGTTTGCAAGTTTGTTTGCTTCATCAACAGCATCTGGGACCCTACAATCTCAAACACCAGCATTCAGTGACTTAATTAGGGCCATGGGGCCTCCGGATCACCCTGCAGATATCTCATGTCCTTCATCATCAGAGGCCATATCTCTTTGCCTCTCCACCACTAATGCCTCACCAATTTTCGCAACAGGAGGGCAGGAGCGCCGCCAGTACACCCCGTCGCCACAGCCGGCCATGTCAGCCACTGCATTGCTGCAGAAAGCTGCTCAAATGGGTGCTGCTGCCACAAATGCCTCTCTGCTTCGCGGGTTTGGCATTGTGTCATCATCTTCTGCTTCAGCCTCATCAAGCCAGCAAGATGGCCTGCAATGGGGTCAGCAGCAATTAGAATCTGAGAGTGGCTCGGTTCCTGCAGGGCTTGGACTCGGTCTTCCATGCGACGGTGGTTCTGGACTGAAGGAATTAATGATGGGAACACCCTCAATGTTTGGTCCTAAACAACACACTACCCTTGATTTTCTAGGATTGGGAATGGCTGCTGGTGGCACTGCCGGTGGAGGCTTATCTGCACTCATCACATCTATTGGTGGTGGTTTGGATGTTACTGCAGCTGCAGCAGCAGCTGCCGCCTTTGGCAATGGAGATTTTTCTGGCAAAGATATTGGAAGGAGCTCTTGA 1536 0.5228 MPVDLDNASTASGDASVSSSGNPTTKKKRNLPGMPDPEAEVIALSPKTLLATNRFVCEICKKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVKKRVYVCPEATCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKVCGTREYKCDCGTVFSRRDSFITHRAFCDALAEESSRSHTVVKANSDNDSKVLTAESPPPPQSNLVHYNNVVAALLFFILVSGVSELPENNPPQVIEEPPQAAAAAALSGSCGSNSSSTCSTSNGAAAAATTSSNSVFASLFASSTASGTLQSQTPAFSDLIRAMGPPDHPADISCPSSSEAISLCLSTTNASPIFATGGQERRQYTPSPQPAMSATALLQKAAQMGAAATNASLLRGFGIVSSSSASASSSQQDGLQWGQQQLESESGSVPAGLGLGLPCDGGSGLKELMMGTPSMFGPKQHTTLDFLGLGMAAGGTAGGGLSALITSIGGGLDVTAAAAAAAAFGNGDFSGKDIGRSS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4147g00001 511 MobiDBLite consensus disorder prediction 1 37 - -
Mupr4147g00001 511 Gene3D Classic Zinc Finger 35 104 - -
Mupr4147g00001 511 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Mupr4147g00001 511 MobiDBLite consensus disorder prediction 190 211 - -
Mupr4147g00001 511 Gene3D Classic Zinc Finger 109 190 - -
Mupr4147g00001 511 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 14 468 IPR031140 -
Mupr4147g00001 511 SMART c2h2final6 96 126 IPR013087 -
Mupr4147g00001 511 SMART c2h2final6 55 77 IPR013087 -
Mupr4147g00001 511 SMART c2h2final6 131 151 IPR013087 -
Mupr4147g00001 511 MobiDBLite consensus disorder prediction 9 27 - -
Mupr4147g00001 511 MobiDBLite consensus disorder prediction 401 422 - -
Mupr4147g00001 511 MobiDBLite consensus disorder prediction 401 420 - -
Mupr4147g00001 511 FunFam protein indeterminate-domain 12-like 34 102 - -
Mupr4147g00001 511 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 77 IPR013087 -
Mupr4147g00001 511 Pfam Zinc finger, C2H2 type 55 77 IPR013087 -
Mupr4147g00001 511 SUPERFAMILY beta-beta-alpha zinc fingers 54 151 IPR036236 -
Mupr4147g00001 511 FunFam protein indeterminate-domain 5, chloroplastic-like 109 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4147g00001 Mupr-Chr4147 13973 16216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4147g00001 1 511 IDZ Gene Family AT5G66730 56.022 2.04e-178 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr4147g00001 zf-C2H2 0.01 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4147g00001 K25869 - gmx:100783947 715.687