Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr412g00004 ATGCCATTCCCCAAAGCAGAAGCTCGAAACCCTTTTTGTTTTAGAGACTCAAAAACCTCTGTTGCATTCATTTTTCAAGTTTGTGGTGACTCAAACTCCAACATGTGTAGGTGGATGACCAACTCAAAGCATTTGTGGGTGCCCATTGTGGTTCTAAGCTTGTTCCTTGGGGTGATGCAGTGCCAGCAAGTGAATGACTATGACCAGATTGATAGTCCCGCTGTTCTTCCCCTTGTTACTCAGCTTGTGTATAGTCAAATCTCCAATTTGACATCACTTCTCAATGAGGAAATAAGTAGAGAATCCACTTTCTGTGTCAAAGATCCGGATGCTGATTGGAATCAAGCATTTAATTTTTCATCTGATTTGGGCTTCTTGGCGTCTTGCATTAAGAAGACTAAAGGAGATATTGCAAAACGTTTGTGTACAGCAGCAGAAATGAAGTTTTACTTAAATAGTTTATTGGGGAAATCTGTAAGTGCCAATTATTTAAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTCTCTGGTTGCGAGCCAGGATGGGCCTGTAGTGTTCACTCAAGCCAGAAGGTTGACCTTAAAAATTCAAAGGAGATGCCTGCAAGAACTTCAAACTGTCAAGCATGCTGTGAAGGCTTCTTTTGTCCTCATGGTATCACATGCATGATACCATGCCCTCTAGGTTCCTATTGCCCTCTTGCCACACTTAATAAAACAACTGGCATATGTGAACCATATCTTTATCAGCTGCCTCCAATGCAGCCAAACCATACCTGTGGTGGAGCAAATGTTTGGGCTGATGTTAGTAGCAGTAGTGAGATATTTTGCTCAGCTGGATCATATTGTCCAACAACCACAAAAAGAATTCCTTGCAGTAGTGGACACTACTGCAGGATGGGTTCTACATCGGAGAAAAGATGCTTCAAGTTGAGTTCATGTAATTCAAACACTGCAACCCAAAATATGCGTGCATATGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAATTGTTCTGACCAAGTTCTCACTACTAGGGAAAGAAGAGTGGCCAAATCTAGAGAAGCCGCAGCTAGAAGTGCAAGGAAGACTGCAAATGCACGCCAAAGATGGCAATTTGCAAAAGATGCCACTAAGAAGGGTGCAACTGGGCTGCAAGCTCAACTATCACGCACCTTCAAGAAGGATGCAGCAAATCTGGAAAAAGTTAAAATTTTGAATCAAGCAACTTCTGAAGCAGATGTTGAATTGTTGTTACATTCACGACCTACAACTTCAAGCATGGTTACGAGTTCATCTGTGGCACCGAAGGGAAAGGGAAAAGAACCCAGTGGTCTAATGCAGATAATACATGAAATTGAAAATGATCCTGATATTAATGACAACATTAGTACAGAAATAGAAACTAGAGGTAAAAGTGTTACAGCAAATGTACCAAAGGGAAAACAACCGCATACTCATAGCCAAATTTTTAAGTATGCATATTCTCAACTTGAAAAAGAGAAGGCTCAGCAACAAGAAAACAAGAAACTTACTTTCTCAGGAGTAATTAAAATGGCTACAAACACTGAAAAAAGGAAAAGGCCTTTAATTGAGATTTCTTTCAAGGATCTGACTCTTACATTGAAAGCTCAAAACAAACATATATTGAGATATGTTACTGGAAAAATTAAACCTGGCCGCATCACTGCTGTCATGGGTCCATCAGGGGCTGGCAAGACAACATTTCTTTCGGCTCTTGCTGGAAAGGCATTTGGATGCTCGGTCACTGGTTCAATTCTTATAAATGGAAGGAATGAATCAATCCACTCCTTTAAGAAAATTACTGGTTTTGTGCCACAAGATGATGTAGTTCATGGAAACCTGACAGTGGAAGAGAATCTCTGGTTCAGTGCACAGTGCAGGCTATCTGCTGACTTGTCAAAACCAGAAAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTTTTGGGGCTTCAATCTGTGCGTAATTCCTTGGTTGGAACTGTTGAAAAGCGAGGGATCTCTGGAGGTCAAAGGAAGCGAGTAAATGTTGGATTAGAAATGGTTATGGAACCTTCACTCTTGATCTTGGATGAACCCACATCTGGCTTGGACAGTGCATCATCTCAGCTCCTTCTAAGAGCACTAAGACGTGAAGCTCTTGAGGGAGTGAACATTTGCACGGTGGTTCACCAACCCAGCTATGCTTTGTTCAAGATGTTTGATGATCTGATACTTCTGGGAAAAGGTGGTCTTACTGTCTATCATGGATCTGCCAAGAAAGTTGAAGAATACTTTTCAGGCCTGGGGATCAATATTCCGGAGCGGATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGCATAACAACACCTGGTGGAAGCTCAGGGCTCAGTTATAAAGAGCTACCAGTTAGATGGATGCTTCATAATGGATATCCAATACCACTTGATATGAGGCAGAATGCAGTTCAATTTGATATGTCCCAGAGTGTTAATTCAGCTAATGAAATAGATCCCAATGGATCTGGTCATTTGGAAAAAACCTTTGCTGGAGAATTATGGCAAGATATGAGAAACAATGTGGTACTGAGGGGGGAGAAGATAAGACTCAATTTTTTTAAATCCAAGGATTTATCTAACCGGAAAACACCTGGTGTATTCAAGCAATATAAGTACTTTCTTATACGTGTTGGGAAGCAGCGATTACGAGAAGCTAGGATCCAAGCCATAGATTATCTTATTTTGTTACTTGCTGGAGCTTGCTTAGGATCACTTACCAAAGCAAGCGATCAAACCTTTGCTCTTCTGTGCAAAATAGCTGCCTTGAGATCATTTTCCTTGGATAAATTACACTACTGCAGGGAGAGTGATTCTGGAATGAGCAGCTTGGCGTATTTTCTGTCTAAAGACACGATCGATATTTTTAATACAGTGATCAAACCTGTGGTTTACCTCTCAATGTTCTATTTCTTTACCAATCCAAGATCGACTTTTGCAGATAATTACATTGTGCTGCTTTGTCTTGTATACTGTGTCACTGGCATAGCATATGCATTGTCTATATTTTTTGAACCTGGCGCAGCTCAGCTATGGTCGGTACTTCTTCCTGTTGTTTTGACACTCGTTGCAACACAACCAAAAGATAGTAAATTTTTGAAGGATATAGCTAATTTATGCTACTCTAAGTGGGCTTTACAAGCATTAGTTGTTGCAAATGCTGAAAGGTATCAGGGAGTGTGGCTCATAACTCGCTGTGGTTCACTTTTGAAAAGTGGCTATAATCTTCATGATTGGAGTTTGTGCATATCCATTCTCATTCTTATGGGTGTAATTGGCCGGGCAATAGCATTTTTCTGTATGGTTACCTTCCAAAAGAAGTAA 3408 0.4043 MPFPKAEARNPFCFRDSKTSVAFIFQVCGDSNSNMCRWMTNSKHLWVPIVVLSLFLGVMQCQQVNDYDQIDSPAVLPLVTQLVYSQISNLTSLLNEEISRESTFCVKDPDADWNQAFNFSSDLGFLASCIKKTKGDIAKRLCTAAEMKFYLNSLLGKSVSANYLKPNKNCNLTSWVSGCEPGWACSVHSSQKVDLKNSKEMPARTSNCQACCEGFFCPHGITCMIPCPLGSYCPLATLNKTTGICEPYLYQLPPMQPNHTCGGANVWADVSSSSEIFCSAGSYCPTTTKRIPCSSGHYCRMGSTSEKRCFKLSSCNSNTATQNMRAYGIMLIAALSTLLLIIYNCSDQVLTTRERRVAKSREAAARSARKTANARQRWQFAKDATKKGATGLQAQLSRTFKKDAANLEKVKILNQATSEADVELLLHSRPTTSSMVTSSSVAPKGKGKEPSGLMQIIHEIENDPDINDNISTEIETRGKSVTANVPKGKQPHTHSQIFKYAYSQLEKEKAQQQENKKLTFSGVIKMATNTEKRKRPLIEISFKDLTLTLKAQNKHILRYVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAFGCSVTGSILINGRNESIHSFKKITGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICTVVHQPSYALFKMFDDLILLGKGGLTVYHGSAKKVEEYFSGLGINIPERINPPDYFIDILEGITTPGGSSGLSYKELPVRWMLHNGYPIPLDMRQNAVQFDMSQSVNSANEIDPNGSGHLEKTFAGELWQDMRNNVVLRGEKIRLNFFKSKDLSNRKTPGVFKQYKYFLIRVGKQRLREARIQAIDYLILLLAGACLGSLTKASDQTFALLCKIAALRSFSLDKLHYCRESDSGMSSLAYFLSKDTIDIFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYALSIFFEPGAAQLWSVLLPVVLTLVATQPKDSKFLKDIANLCYSKWALQALVVANAERYQGVWLITRCGSLLKSGYNLHDWSLCISILILMGVIGRAIAFFCMVTFQKK 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr412g00004 1135 ProSitePatterns ABC transporters family signature. 681 695 IPR017871 GO:0005524|GO:0016887
Mupr412g00004 1135 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 280 1122 - -
Mupr412g00004 1135 Pfam ABC transporter 559 709 IPR003439 GO:0005524
Mupr412g00004 1135 Gene3D - 538 775 IPR027417 -
Mupr412g00004 1135 CDD ABCG_EPDR 538 764 - -
Mupr412g00004 1135 SMART AAA_5 566 758 IPR003593 GO:0016887
Mupr412g00004 1135 FunFam ABC transporter G family member 24 534 776 - -
Mupr412g00004 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 540 773 IPR027417 -
Mupr412g00004 1135 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 540 781 IPR003439 GO:0005524
Mupr412g00004 1135 Pfam ABC-2 type transporter 738 1135 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr412g00004 Mupr-Chr412 78217 86897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr412g00004 564 759 Calmodulin-binding Proteins AT2G36910 25.581 7.15e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr412g00004 - - gmx:100775464 2005.33