Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4128g00001 ATGTCGACCAAGAACAAGAATTTTATGGCTTCTGGCAGTGTTAACGCAGCTGCAAATACACAAGATAAATGGAAGTCCAGCAAGAACACATTATTTGGAAGTGGGTCCCAGCCAAAAGAGAAGTCAGCCGCAAGGACAGTAGCAAGAGGACCTGATACAAAGCAAGAGACCATTAAGCCTGGGATTTGGCAATGCTCCATTTGCACCTATGACAATGATGAGAGTATGACTTCGTGTGATATCTGTGGTGTTGTACGTCGTCCCTTGCCTAACATTGGAACTTCCAACAGTAATAAAACAGGAGAAAAGGGGGAGGGAGGGGAGTCAAAGAATATGGTGTTAGGTTTACAACAATGGCCACGATATACCTATAACCTATTGAACAATGTCTTTGGTGCAGTTGAAGACATAAGCAAAAGTCCTGGAGCATCCAAGTTGGCCAGGTCTCTTTTCCAATCATTACCACAACAGATTCCCAAAGAGGTTGTATTATTTTCGAAGCCCGGTGATGGTTTTCTGACAGATGGCAGTAACTTCTACAAGCTTGAGAATGTCCAAGGAGAATTTCATGAAATTCATAAGGCTTTTAGTACTCAAAGCCATCCACATTTAAACATAGATCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTGGTTCATACTGGCCTACATTCTTCCAAAATGGGTTTGAAAGAATCAGAACTCAAGGTCATTGCTCAAGGATTATGTGAAATGCTCTGGCTGAAAATTATCCTAGATAATTTGAGAGTCAAACTGGAAGGTCCTATGAAGTTCTATTGTGACAAGTTGACTATCAATATTGCTTGTAATCCCATACAAAATGATAGGACAAAGCATATTGATATTGACAGGCATTTTGTTGAAGAAAAATTAAAGGACAAAGTGACAATCTCTAAAAGTTCTCAGCTTTCATCAAGCATCGGAGAGAAGAATGAACGTTCTGTACAATCAAATGCTGAAAGTTCAGACAACTTATCATCTTTAATGCGAAAGAGCAGGAATAGTTCAGCTGAGAGCAAGCTTTCCAAAAATGTAGCAATTGATCTGCAAAAAAGTGGGAAAACTTCAAACAGCTTGCCAGAATCTTTGTCAAAAGACAAAGGTGACAATATTAATAAAATAAATTCTTCGAAAAATGGTACAATTGATATTCAATCAAGCAAAGAAAAGTCAGATAGTTTGTCTGCACTGTCAAAAATCAAGCAAAGTGATAACATTAGTTTCTCTTCTATCAAAGATGGAAAACCTGAAAGTATTTCCAGCAGTTTCAACAACATGGTTCTCGATGTAAGATCAGGAAATTTAGATAATACTAATGCTAAGGAACCTCGTTCACATGTTTCTTATAAGCCAGAAAAATGGATGCTCCCTCAACAAGCTGAAGATGCATTGACTCAGCTGAATCTTGCAATTGTTGGCCATGTTGATTCTGGAAAATCAACTCTATCTGGTAGGTTACTACACCTATTGGGACGGATTTCCCAGAAAGAAATGCATAAATATGAAAAGGAGGCCAAGTTACAGGGCAAGGGATCCTTTGCTTATGCTTGGGCACTAGATGAAAGCTCTGAAGAAAGAGAAAGAGGAATAACTATGACAGTGGCTGTTGCTTATTTTGACACCAAGAAATATCATGTTGTTGTGCTTGACTCCCCTGGCCATAAAGATTTTGTCCCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATAGATGCCTCACTTGGTTCATTTGAGGCTGGTATGGATGGCAGCAAAGGGCAAACAAGGGAGCATGCACAACTTATCAGAAGCTTTGGTGTTGACCGGGTTATAGTTGCAGTAAATAAGATGGATGCTGTTGTGTACTCCCAAGAGCGATTTGATTTTATAAGGCAGCAGCTGGGATTTTTTCTCCACTCATGTGGTTTCAGAGATTCTTCTCTATCTTGGATTCCCATGAGTGTCATGGAAAATCAAAATTTGGTGGCATCCCCTTCTGATGCTCGTTTCAAAAATTGGTATGGTGGACCTTATCTGTTAGATGCAATTGACTCTCTCCAACCTCCTACTAGAGAATTCTCAAAACCTCTACTAATGCCAATATGTGATGTCATCAAATCAACTATGATTGGACAGGCGTCTGCTTGTGGTAAACTGGAAGCAGGAGCTCTTCGGAGTGGATCGAAGGTCTTAGTTATGCCTGCAGCTATTGTGGGAACAGTACGCTCATTGGAGCGTGACTCTAATGCCTGTACTGTTGCAAGAGCTGGAGATAATGTAGCTGTAACATTGCAAGGTATTGATGGAAGTCATGTGATGGCAGGAGGTGTACTATGCCATCCTGACTTTCCTGTTGCAGTTGCTAAGCATTTGGAGTTGAAAGTGCTAGTGTTGGATGGTGCAAGTCCCATATTGGTGGGCGCACAGTTAGAGTTTCATATACACCATGCGAAGGAACCTGCTAGAGTTTCAAGAATATTATCAGTACTTGATCCCAAGACTGGTAAGGTGACCAAAAAGTCACCTCGCTGTCTCACTGCAAAACAAAGTGCAGTAATTGAGGTGATTTTGCACGAGTCAGTATGTGTGGTAGAATTCTCTAGGTGTAAAGCTCTTGGAAGGGTGTCCCTAAGATCACTGGGAAGAACAATTGCCGTTGGAGTTGTGACAAGAATAGTTGAAGAACAAGGCTTAGGATGCAAAGCCTTGCTGTAG 2733 0.4076 MSTKNKNFMASGSVNAAANTQDKWKSSKNTLFGSGSQPKEKSAARTVARGPDTKQETIKPGIWQCSICTYDNDESMTSCDICGVVRRPLPNIGTSNSNKTGEKGEGGESKNMVLGLQQWPRYTYNLLNNVFGAVEDISKSPGASKLARSLFQSLPQQIPKEVVLFSKPGDGFLTDGSNFYKLENVQGEFHEIHKAFSTQSHPHLNIDPFKFDVPSPDDVVHTGLHSSKMGLKESELKVIAQGLCEMLWLKIILDNLRVKLEGPMKFYCDKLTINIACNPIQNDRTKHIDIDRHFVEEKLKDKVTISKSSQLSSSIGEKNERSVQSNAESSDNLSSLMRKSRNSSAESKLSKNVAIDLQKSGKTSNSLPESLSKDKGDNINKINSSKNGTIDIQSSKEKSDSLSALSKIKQSDNISFSSIKDGKPESISSSFNNMVLDVRSGNLDNTNAKEPRSHVSYKPEKWMLPQQAEDALTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMDGSKGQTREHAQLIRSFGVDRVIVAVNKMDAVVYSQERFDFIRQQLGFFLHSCGFRDSSLSWIPMSVMENQNLVASPSDARFKNWYGGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSTMIGQASACGKLEAGALRSGSKVLVMPAAIVGTVRSLERDSNACTVARAGDNVAVTLQGIDGSHVMAGGVLCHPDFPVAVAKHLELKVLVLDGASPILVGAQLEFHIHHAKEPARVSRILSVLDPKTGKVTKKSPRCLTAKQSAVIEVILHESVCVVEFSRCKALGRVSLRSLGRTIAVGVVTRIVEEQGLGCKALL 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4128g00001 910 FunFam Elongation factor 1 alpha-like protein 465 696 - -
Mupr4128g00001 910 ProSitePatterns Zinc finger RanBP2-type signature. 63 82 IPR001876 -
Mupr4128g00001 910 MobiDBLite consensus disorder prediction 381 396 - -
Mupr4128g00001 910 Gene3D - 463 696 IPR027417 -
Mupr4128g00001 910 SMART zf_4 61 85 IPR001876 -
Mupr4128g00001 910 CDD RNase_HI_RT_Ty1 233 303 - -
Mupr4128g00001 910 PANTHER TRANSLATION FACTOR 471 898 - -
Mupr4128g00001 910 CDD HBS1_C_III 790 898 - -
Mupr4128g00001 910 CDD EF1_alpha 476 695 - -
Mupr4128g00001 910 PRINTS GTP-binding elongation factor signature 535 543 IPR000795 GO:0003924|GO:0005525
Mupr4128g00001 910 PRINTS GTP-binding elongation factor signature 476 489 IPR000795 GO:0003924|GO:0005525
Mupr4128g00001 910 PRINTS GTP-binding elongation factor signature 616 625 IPR000795 GO:0003924|GO:0005525
Mupr4128g00001 910 PRINTS GTP-binding elongation factor signature 555 565 IPR000795 GO:0003924|GO:0005525
Mupr4128g00001 910 PRINTS GTP-binding elongation factor signature 571 582 IPR000795 GO:0003924|GO:0005525
Mupr4128g00001 910 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 795 899 IPR009001 -
Mupr4128g00001 910 MobiDBLite consensus disorder prediction 310 373 - -
Mupr4128g00001 910 Pfam Elongation factor Tu GTP binding domain 475 691 IPR000795 GO:0003924|GO:0005525
Mupr4128g00001 910 ProSiteProfiles Zinc finger RanBP2 type profile. 59 88 IPR001876 -
Mupr4128g00001 910 Gene3D Translation factors 699 791 - -
Mupr4128g00001 910 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 472 703 IPR000795 GO:0003924|GO:0005525
Mupr4128g00001 910 MobiDBLite consensus disorder prediction 1 41 - -
Mupr4128g00001 910 FunFam Translation elongation factor EF-1 699 789 - -
Mupr4128g00001 910 MobiDBLite consensus disorder prediction 90 109 - -
Mupr4128g00001 910 Gene3D - 55 98 - -
Mupr4128g00001 910 Pfam Elongation factor Tu C-terminal domain 791 898 IPR004160 -
Mupr4128g00001 910 MobiDBLite consensus disorder prediction 310 396 - -
Mupr4128g00001 910 Gene3D Translation factors 793 903 - -
Mupr4128g00001 910 SUPERFAMILY Translation proteins 694 789 IPR009000 -
Mupr4128g00001 910 MobiDBLite consensus disorder prediction 1 55 - -
Mupr4128g00001 910 SUPERFAMILY Ran binding protein zinc finger-like 61 86 IPR036443 -
Mupr4128g00001 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 717 IPR027417 -
Mupr4128g00001 910 FunFam elongation factor 1-alpha isoform X4 793 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4128g00001 Mupr-Chr4128 2107 14818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4128g00001 61 98 Eukaryotic Initiation Factors Gene Family AT5G10630 55.263 1.12e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4128g00001 K14416 - gmx:100801724 1075.46