Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4127g00001 CTATTCTGCTTTCAGTTCAGTGTGATTGGGTTTAGTTTCCATTACAGTGGCTTCTCTGTGCATATTGTAATTGGTGTGCAACCCTACAATAATATGGCAGAGGATATGGAAATTGATCATATTGTAGAAGTTCCTGATACCCCAGATAGAATAACCATAAGGCGTGATGATAAGAAATATTTAGGTAATCCTGAGAAGAGGGGGAGAGCTTTTAATGTTGCTGATGAAATGAATAACCACAGTAACTATATAACATTGTCACCGTCAGAGGAGTCTTGTCCTTCTCAAAATGCTCCCATCTTTAGGAGAGCCCAAACTGAGAAAATTCTTGGACTTGGGGCAACACATTCTAATGGAAATGAAAAGATGGAGAGAGGGAAAACTATAATCTCCAGGGTTCCTTCTAAATCATCTCACCGCAGGCCTATTTCTGTTTTAGATTTAACTGAAGAGAATGGACAGTTCCAACAACTGAAACCAGCTTTCTCACACCATGGATCAAGAGATAATGCAACTGAAGACAAGAAATCATTCAAAGCAAGTATTGGGAACTCTTCGTTTCCAGCCATCATTGATTCTTCTAATACATCTAGAAATGCCTTCACTGGAAAGTGTAAACTAGATAATAAAACACTTCCAGGTCCTACTGTGGACCGTGGCAAGAGTATTTCTCTGTCTAATGATTCTCAATCACAAAATGAAAAGAAAGTGTCTTTGCCTCCTCATGTTTCCACCACTCCACAAGGTAGAGGGCACAAGAGATTGGTAAGAAATGGGTGCATTTCACCTCATAATATTGCAACAAGGGCAAAACAATTAGCTGAACAGAGCAACCATCAAAGCAAAGATGTTGAACAGAGTGATGCTGGTCATTCAGTTTCTAACAATGCAGTGTCACCGAATAGTGTTGATGGCATAGTTGCTGAAGAAAGAGGCAATGGTAGAGTGAAAGGAAAGGGAGTACTTACTCATCCTTCATCACATGGACTTATTACTGGAACTTTTCACACTGCTAACAGCCCTGTGATTAATTATGAAGAGGTCAATGGTACCAGTAATGCTATAAGAAATTCACTTCAAAACTCTGGAGGGCAAGGTGGTTGGAGAACTACACATAATGAGAGGAATGCTGATCAGCCCTTGCGTGATGTAAATGGGCATCATTCAAGGAGAAATAATGATGTTGGAAGATTAATTAATCGACAGAATGCAAACAGAATGGACAGAAGAAACACTGGAAGTGGTCAAAGCAGCAAGCATGTACATGGTTCTCTAGGTCATAAAGCTCGACCAACTTCTGTGATCATTGAAGATGTGGACCAGTCATCTGGAACCCGTCCTACTGCTGACATTTTGACTAAAAGGCAAAGGAAACGTGACTCACATTCAGGAACACCTAATGAAGCCTCTTCTAATTCAGAAATTATGTTCCTCGATACATTTGGGGAATCATCAAGCTCATCCCGGAGCCCTGTCTTGCATCCTGAAGTGGTTGAGTTATCCACACCAAGCTACACCAACAGATCATCTGAAGATTTAGATGATAATGACAATAGCTCGGAAGCTCGGGCGAGACAAGTGGAAGCAGATGAGATATTGGCACGCGAACTCCAAGAACAACTGTATCATGATGATTCTTTTGAAGGCAGAGGGATTGATGAACATTTAGCATGGGAGCTGCAGCATGCAGAAGGTCTTCTGCGTACATCTATTGATAGTCACAGTCACAGCAATATATATCATCCTACAGGGTTTCCCAGGGCAAATAGACAGCCTCGTACAAGGCCTCATCAAAATCCTTCTAGAAGGAGAGCTATGCCTCAAGTTTCTTTCTCTAATAGAATGTCACAGTGGAGGAGTCGAGTTAATAGTCGGACTCGGTCACCTATCATATCATCTAGAGGAAGAGGCCCCCAGTTTCCTCTGGATATGGACTTAGACATGAGACTTGATATATTGGAAGCCTTAGAGGATTCAATAGGGGATTTCAGTGATATGGGAATGGCTGATGACATCTTTAATGCACGAGCAGCACGGCGTGATTTCAATGAAGACGATTATGAAATGTTATTGGCCCTTGATGAGGGAAATCACCAACATACTGGTGCATCTACCAATCTGATCAATAGCTTACCACAGTCCACCATCCAGACTGACAACTTCACAGATGCATGTGCCATATGTCTTGAGACCCCAGTCAAGGGAGAAACTATCCGCCACCTTCCTTGTTTTCACAAATTTCACAAAGATTGTATCGATCCTTGGCTCCAAAGGAAAACATCGTGCCCGGTGTGCAAGTCATCTGTCGCCTAA 2313 0.4194 LFCFQFSVIGFSFHYSGFSVHIVIGVQPYNNMAEDMEIDHIVEVPDTPDRITIRRDDKKYLGNPEKRGRAFNVADEMNNHSNYITLSPSEESCPSQNAPIFRRAQTEKILGLGATHSNGNEKMERGKTIISRVPSKSSHRRPISVLDLTEENGQFQQLKPAFSHHGSRDNATEDKKSFKASIGNSSFPAIIDSSNTSRNAFTGKCKLDNKTLPGPTVDRGKSISLSNDSQSQNEKKVSLPPHVSTTPQGRGHKRLVRNGCISPHNIATRAKQLAEQSNHQSKDVEQSDAGHSVSNNAVSPNSVDGIVAEERGNGRVKGKGVLTHPSSHGLITGTFHTANSPVINYEEVNGTSNAIRNSLQNSGGQGGWRTTHNERNADQPLRDVNGHHSRRNNDVGRLINRQNANRMDRRNTGSGQSSKHVHGSLGHKARPTSVIIEDVDQSSGTRPTADILTKRQRKRDSHSGTPNEASSNSEIMFLDTFGESSSSSRSPVLHPEVVELSTPSYTNRSSEDLDDNDNSSEARARQVEADEILARELQEQLYHDDSFEGRGIDEHLAWELQHAEGLLRTSIDSHSHSNIYHPTGFPRANRQPRTRPHQNPSRRRAMPQVSFSNRMSQWRSRVNSRTRSPIISSRGRGPQFPLDMDLDMRLDILEALEDSIGDFSDMGMADDIFNARAARRDFNEDDYEMLLALDEGNHQHTGASTNLINSLPQSTIQTDNFTDACAICLETPVKGETIRHLPCFHKFHKDCIDPWLQRKTSCPVCKSSVA 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4127g00001 770 ProSiteProfiles Zinc finger RING-type profile. 725 766 IPR001841 -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 355 374 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 510 525 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 220 245 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 501 525 - -
Mupr4127g00001 770 SUPERFAMILY RING/U-box 718 769 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 114 141 - -
Mupr4127g00001 770 CDD RING-H2_PA-TM-RING 725 766 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 601 633 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 287 302 - -
Mupr4127g00001 770 FunFam RING/U-box superfamily protein 690 770 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 355 474 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 436 450 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 581 636 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 375 395 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 271 304 - -
Mupr4127g00001 770 PANTHER SI:CH211-59O9.10 357 770 - -
Mupr4127g00001 770 Pfam Ring finger domain 724 766 IPR001841 -
Mupr4127g00001 770 SMART ring_2 725 765 IPR001841 -
Mupr4127g00001 770 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 692 770 IPR013083 -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 203 256 - -
Mupr4127g00001 770 MobiDBLite consensus disorder prediction 396 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4127g00001 Mupr-Chr4127 7007 13333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4127g00001 520 769 C3H Transcription Factor Family AT1G04790 48.551 1.82e-61 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4127g00001 - - aprc:113872307 1069.68