Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4120g00001 GTAGCTAGGTTGCAGGTTGTGGCAGAGATGGAGTTTCCGAACGAAGCAACATCAGAAGGGTTTTCTCATCAGAAGAAAACGGGAAGAGGGAAAATAGAAATAAAGAGGATTGAGAACACAACCAATAGACAAGTTACCTTCTGCAAGCGCCGCAACGGCTTGCTCAAGAAGGCTTACGAATTGTCTGTTTTGTGTGATGCTGAAGTTGCTCTTGTTGTCTTCTCTACCCGTGGTCGCCTCTATGAGTATGCCAACAACAGTGTTAGAGGAACCATCGATAGGTACAAGAAAGCATGTGCTGCTTCCTCAAATGCAGAATCTGTCTCTGAAGCTAATACACAGTTTTATCAGCAGGAATCGTCCAAATTAAAAAGACAAATCAGAGACATTCAGAATCTGAACAGGCATATCCTTGGTGAAGCACTTAGCTCTCTGAGTCTAAAGGAGTTAAAGAACCTTGAGAGTAGGTTGGAGAAAGGTTTAAGCAGAGTTAGATCCAGAAAGCATGAAACATTGTTTGCTGATGTCGAGTTCATGCAAAAGCGGGTACTCATCATTTCTTTAGATGAAATCGAGCTGCAAAACCATAACAATTTTCTGCGAACTAAGGTCTCTTCATTCATTCCCTCCAAGAATATAGCTGAAGACGAGAGAGCACAGCAACATGTGTGCGAGTCCATTCCTTCACAATCATATGACCGCAATTTCTTCCCTGTAAATCTCATAGATTCCAATCATCAATATTCACGTCAAGACCAAACGCCTCTTCAACTTAATTTTCATGTAAGGCATATCCAAGAATTTGTAGTGAGTCGTTACGTTGCAAGTGGTGTGAACAAGAGAAACCAAGAACCAGAATTTCTAGCAATACATCATATGATTTTGTTTATGTATCCAATCGAAATTCATAGTGATTTTCACTCTATTGGTATTAATTTGAAAATAATCCTTTTCAAGACACAATTCTCGATAAAAGCACCAAATGTCTGCTTCCAAAATCCTCACCTTTCAGCAGTGACCAAATTAGGCAACATTTGTCACCAGACCCCGTTCCTTATCCAGGTTGGAGTCACAGGGAAATCGTACCAATCAATTGTCAAGGTTCCTTTCCCTACTTTGTGA 1122 0.4055 VARLQVVAEMEFPNEATSEGFSHQKKTGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYANNSVRGTIDRYKKACAASSNAESVSEANTQFYQQESSKLKRQIRDIQNLNRHILGEALSSLSLKELKNLESRLEKGLSRVRSRKHETLFADVEFMQKRVLIISLDEIELQNHNNFLRTKVSSFIPSKNIAEDERAQQHVCESIPSQSYDRNFFPVNLIDSNHQYSRQDQTPLQLNFHVRHIQEFVVSRYVASGVNKRNQEPEFLAIHHMILFMYPIEIHSDFHSIGINLKIILFKTQFSIKAPNVCFQNPHLSAVTKLGNICHQTPFLIQVGVTGKSYQSIVKVPFPTL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4120g00001 373 ProSiteProfiles K-box domain profile. 113 210 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mupr4120g00001 373 PANTHER SERUM RESPONSE FACTOR HOMOLOG 29 215 - -
Mupr4120g00001 373 FunFam agamous-like MADS-box protein AGL11 39 122 - -
Mupr4120g00001 373 Gene3D - 39 110 IPR036879 GO:0003677|GO:0046983
Mupr4120g00001 373 Coils Coil 116 136 - -
Mupr4120g00001 373 Pfam K-box region 111 204 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mupr4120g00001 373 PRINTS MADS domain signature 64 85 IPR002100 GO:0003677|GO:0046983
Mupr4120g00001 373 PRINTS MADS domain signature 29 49 IPR002100 GO:0003677|GO:0046983
Mupr4120g00001 373 PRINTS MADS domain signature 49 64 IPR002100 GO:0003677|GO:0046983
Mupr4120g00001 373 SUPERFAMILY SRF-like 28 102 IPR036879 GO:0003677|GO:0046983
Mupr4120g00001 373 Coils Coil 147 167 - -
Mupr4120g00001 373 ProSiteProfiles MADS-box domain profile. 27 87 IPR002100 GO:0003677|GO:0046983
Mupr4120g00001 373 CDD MADS_MEF2_like 28 104 IPR033896 GO:0000977|GO:0045944
Mupr4120g00001 373 ProSitePatterns MADS-box domain signature. 29 83 IPR002100 GO:0003677|GO:0046983
Mupr4120g00001 373 SMART madsneu2 27 86 IPR002100 GO:0003677|GO:0046983
Mupr4120g00001 373 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 36 83 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4120g00001 Mupr-Chr4120 699 8396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4120g00001 16 258 MADS-box Gene Family AT2G42830 66.532 5.66e-111 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mupr4120g00001 K-box 6.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4120g00001 K09264 - gmx:100792224 375.555