Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4105g00001 ATGTTCCAAGCTAAGGTAGTGGCCTTAATTTTGATATGGTGGAGCAGTAATATTGTTGAAGATGCAGTTGCAGGCCCGGATATAAATCTAATAAACAGTGGATGCAGCAATTACAACGCTTCGAGCTTGCGTAACTTCTTTGCGGATCTGAATGCAACATTTTCATACATGAGAGGAGAGGTTAAGAATAATAACAAGCACTTTGGCACAACAGATCAAGCAAGAGGAGATGCCTTGACATATGCTATGTTTCAATGCAGAAACTACCAATCCAAAAATGACTGTCTTGTTTGCCTCAACACCGCCATCACCCAAATCCAAAACTGCTCCAAAGCCAACGGCGCCAGAGTCATCTACGATGGTTGCTTCCTCAGGTATGAGAGCGAGAGGTTCTACAATCAGACGAATGAACTAGGCAGTGGGGTATTATGTGGGAACACGATTTCAAGTGTCACTGGCTTTGGAGAAGCTGGACAACAAGCGTTAATGGATCTCCAAATAGCAACACCCAAAACTAAAGATTTCTATGCAGCTACTAAGACACAAGTGGTAGGTGGCAGTGCAATTTATGCCATTGCACAGTGTGTTGAAACTGCCACAGAGACTAATTGTCTGAACTGCATGCAAGTTGGATACAACAACTTACAAAGTTGTCTTCCCTACACAGAGGGTAGATCATATGATGCTGGCTGTTATATGAGATACTCCACCACACCCTTCTTTGCTGATAACCAGACCATTGATATCACACCCTATTTTAAACATGGAGATTCAAGCAAGAAGTGGGCTATTATAGGTGGTGGTGTAGGAGCTGTTGTTCTCATACTTGCCTTGTTTGCATGGAGATTGTCTAGAAAATCAAAGGGGGTTCCCAGAGCTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTAACTACAAGTATAAAGATTTGAAAGCTGCAACAAAAAATTTCAGTGCTGAAAATAAACTTGGAGAAGGAGGTTTTGGTGATGTGTACAAGGGTACTCTAAGAAATGGAAAAGTTGTTGCCGTCAAGAAACTAATGTTGGGGAAATCTAGCAAGATGGAGGATGATTTTGAAGGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTGTTGCAGCAAAGGCCAAGAGAGAATCTTAGTTTATGAATACATGGCAAATAGCAGCCTTGACAAATTTTTATTTGGTAACAGAAAAGGTTCCCTCAATTGGAAACAACGGTATCACATAATTTTAGGCACAGCAAGGGGACTAGCATATCTACATGAGGAATTCCACGTGTCCATCATACATAGAGATATAAAGACTGCTAATATTCTCTTGGATGATGATCTTCAGCCCAAAATTGCTGATTTTGGTTTGGCAAGGCTTCTGCCAGGGGATCGTTCTCATCTTAGCACAAAATTTGCTGGAACATTGGGATACACAGCACCTGAGTATGCAATGCATGGTCAATTATCAGAGAAGGCTGATACCTACAGCTATGGTATTGTAGTCCTTGAAATCATAAGTGGTGAAAGGAGTACTAATGTGAAGGATGATGAAGATGGTGAATACCTTCTTCAACGATCATGGAAACTGCATGAGAGAGGCTTGCACATGGAGCTGGTGGACAAGGCCATAGACCCTAATGAATATGAAGCAGAAGAAGTGAAGAAAATCATAGAAATTGCTTTATCGTGCACCCAACCTTCAGCTTCAACGAGGCCAACAATGTCTGAAGTAGTAGCCCTACTCAAAAGCAAGAGCTTAGTGGAGCACCTGCGACCAACCATGCCAGTGTTTGTTGAAACCAATGTGATGCCTCGGGAAGGAAACTCTACTAAGCTGAGAGGAGATGTAAAGAACGAGAGCACACACTTTGGCATAGCACAGCAAGCGAGGGGAGAGGTATTGACGTATGCAATGTTTCAATGCAGAAACTATCTGTCCATAAAAGACTGTCTTGCTTGCTTCGATGTTGCCTCCATCCAAATCCGCAACTGCTCCACCGGCAACGGCGCTAGAGTCATCTACGATGGCTGTTTCCTCAGGTATGAGAGCGAGAGGTTCTACGATCAGACCGCTGAACCTGGAAATGGTGTATCATGTGGAAACATTAGTGCAAATGCCACTGGTTTTAAAGCAGTTGGACAACAAGCGCTAATGGACCTCCAAATTGCAACACCCAAAATTAAAGGGTTTTATGCAGCTACTAAGACCCAGGTGGTTGCTGGCAGTGCAATTTATGCCATTGCACAGTGTGTTGAAACTGCCTCAGAGCCTAATTGTCTCAATTGCTTGCAACTTGGATACAACAATTTACAAAGTTGTCTTCCCAACACAGAGGGTAGAGCATATGATGCTGGCTGTTTTATGAGATACTCCACAAAACCCTTCTTTGCTGATAATCAGACCATTGATATTGCTCCCTATTTAAAACATGGAGATTCAAGCAAGAAGTGGCCTATTATAGGTGGTGTTATAGGAGCTGTTCTTCTCCTCCTTGCATTGTTTGCATGGAGATGGTCCAGAAAACCAAAGAGAGTTTCCAGAGGTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTAACTACAAGTATAAAGATTTGAAAGCTGCAACAAAAAATTTCAATGCCGAAAATAAACTTGGAGAAGGAGGTTTTGGTGACGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCCATCAAGAAACTAGTGTTGGGGAAGTCTAGCAAGATGGAGGATGATTTTGAAGGTGAAGTGAAGCTAATAAGTAATGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTGTTGCAGCAAAGGCCAAGAGAGAATCCTAGTTTATGAATACATGGCAAATAGCAGTCTTGACAAATTCTTATTTGGCACAGCAAGGGGACTAGCATATCTACATGAGGAATTCCACGTGTCCATCATACATAGAGATATAAAGACTGCTAATATTCTCTTGGATGATGATCTTCAGCCCAAAATTGCTGATTTTGGTTTGGCAAGGCTTTTGCCAGAGGATCGTTCTCATCTTAGCACAAGATTTGCAGGAACATTGGGATACACAGCGCCAGAGTATGCAATCCATGGTCAATTATCAGAGAAGGCTGATGCCTACAGCTATGGTATTGTGGTCCTAGAAATCATAAGTGGTCAAAAGAGTACCGATGTGAAGGGTGATGAGGATGCTCGTGAATTCCTTCTTCAACGAACGTGGAAACTGTACGAGAGAGGCATGCATTTGGAGCTGGTGGACAAGGCCATCGACCCAAATGACTATGACGCAGAAGAAGTGAAGAAAATCATAGAAATTGCTTTATTATGTACTCAAGCATCAGCTGCAACGAGGCCAACAATGTCTGAAGTAGTGGTGCTACTCAAAAGCAAGAGCTTAGTGGAGCACTTGCGACCAACTATGCCTGTGTTTGTTGAAACGAATATGAAGACTCGGGAAGGCAACTCTGGCTCAACCACTGTCTCTTCTTCTAATGCTACTGCCTCTATTTCTGTTCTATCAGCCCGATGA 3561 0.4246 MFQAKVVALILIWWSSNIVEDAVAGPDINLINSGCSNYNASSLRNFFADLNATFSYMRGEVKNNNKHFGTTDQARGDALTYAMFQCRNYQSKNDCLVCLNTAITQIQNCSKANGARVIYDGCFLRYESERFYNQTNELGSGVLCGNTISSVTGFGEAGQQALMDLQIATPKTKDFYAATKTQVVGGSAIYAIAQCVETATETNCLNCMQVGYNNLQSCLPYTEGRSYDAGCYMRYSTTPFFADNQTIDITPYFKHGDSSKKWAIIGGGVGAVVLILALFAWRLSRKSKGVPRADILGATELKGPVNYKYKDLKAATKNFSAENKLGEGGFGDVYKGTLRNGKVVAVKKLMLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDKFLFGNRKGSLNWKQRYHIILGTARGLAYLHEEFHVSIIHRDIKTANILLDDDLQPKIADFGLARLLPGDRSHLSTKFAGTLGYTAPEYAMHGQLSEKADTYSYGIVVLEIISGERSTNVKDDEDGEYLLQRSWKLHERGLHMELVDKAIDPNEYEAEEVKKIIEIALSCTQPSASTRPTMSEVVALLKSKSLVEHLRPTMPVFVETNVMPREGNSTKLRGDVKNESTHFGIAQQARGEVLTYAMFQCRNYLSIKDCLACFDVASIQIRNCSTGNGARVIYDGCFLRYESERFYDQTAEPGNGVSCGNISANATGFKAVGQQALMDLQIATPKIKGFYAATKTQVVAGSAIYAIAQCVETASEPNCLNCLQLGYNNLQSCLPNTEGRAYDAGCFMRYSTKPFFADNQTIDIAPYLKHGDSSKKWPIIGGVIGAVLLLLALFAWRWSRKPKRVSRGDILGATELKGPVNYKYKDLKAATKNFNAENKLGEGGFGDVYKGTLKNGKVVAIKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDKFLFGTARGLAYLHEEFHVSIIHRDIKTANILLDDDLQPKIADFGLARLLPEDRSHLSTRFAGTLGYTAPEYAIHGQLSEKADAYSYGIVVLEIISGQKSTDVKGDEDAREFLLQRTWKLYERGMHLELVDKAIDPNDYDAEEVKKIIEIALLCTQASAATRPTMSEVVVLLKSKSLVEHLRPTMPVFVETNMKTREGNSGSTTVSSSNATASISVLSAR 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4105g00001 1186 SUPERFAMILY Protein kinase-like (PK-like) 868 1155 IPR011009 -
Mupr4105g00001 1186 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Mupr4105g00001 1186 CDD STKc_IRAK 325 591 - -
Mupr4105g00001 1186 SUPERFAMILY Protein kinase-like (PK-like) 304 604 IPR011009 -
Mupr4105g00001 1186 ProSiteProfiles Gnk2-homologous domain profile. 136 240 IPR002902 -
Mupr4105g00001 1186 Gene3D Transferase(Phosphotransferase) domain 1 396 600 - -
Mupr4105g00001 1186 Gene3D Transferase(Phosphotransferase) domain 1 960 1149 - -
Mupr4105g00001 1186 FunFam Cysteine-rich receptor-like protein kinase 2 849 959 - -
Mupr4105g00001 1186 FunFam Cysteine-rich receptor-like protein kinase 2 703 804 - -
Mupr4105g00001 1186 Pfam Protein kinase domain 320 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4105g00001 1186 Pfam Protein kinase domain 884 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4105g00001 1186 CDD STKc_IRAK 889 1139 - -
Mupr4105g00001 1186 ProSiteProfiles Protein kinase domain profile. 883 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4105g00001 1186 FunFam Cysteine-rich receptor-like protein kinase 2 396 598 - -
Mupr4105g00001 1186 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 81 610 - -
Mupr4105g00001 1186 ProSiteProfiles Gnk2-homologous domain profile. 596 695 IPR002902 -
Mupr4105g00001 1186 SMART serkin_6 319 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4105g00001 1186 SMART serkin_6 883 1144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4105g00001 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Mupr4105g00001 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 987 999 IPR008271 GO:0004672|GO:0006468
Mupr4105g00001 1186 ProSiteProfiles Gnk2-homologous domain profile. 699 804 IPR002902 -
Mupr4105g00001 1186 Gene3D Phosphorylase Kinase; domain 1 289 395 - -
Mupr4105g00001 1186 Gene3D Phosphorylase Kinase; domain 1 852 959 - -
Mupr4105g00001 1186 FunFam Cysteine-rich receptor-like protein kinase 2 284 395 - -
Mupr4105g00001 1186 ProSitePatterns Protein kinases ATP-binding region signature. 325 348 IPR017441 GO:0005524
Mupr4105g00001 1186 Pfam Salt stress response/antifungal 630 692 IPR002902 -
Mupr4105g00001 1186 Pfam Salt stress response/antifungal 715 801 IPR002902 -
Mupr4105g00001 1186 Pfam Salt stress response/antifungal 37 128 IPR002902 -
Mupr4105g00001 1186 Pfam Salt stress response/antifungal 152 237 IPR002902 -
Mupr4105g00001 1186 Gene3D - 704 804 IPR038408 -
Mupr4105g00001 1186 Gene3D - 27 131 IPR038408 -
Mupr4105g00001 1186 Gene3D - 142 240 IPR038408 -
Mupr4105g00001 1186 Gene3D - 617 695 IPR038408 -
Mupr4105g00001 1186 FunFam Cysteine-rich receptor-like protein kinase 2 959 1146 - -
Mupr4105g00001 1186 ProSitePatterns Protein kinases ATP-binding region signature. 889 912 IPR017441 GO:0005524
Mupr4105g00001 1186 ProSiteProfiles Protein kinase domain profile. 319 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr4105g00001 1186 FunFam Cysteine-rich receptor-like protein kinase 2 139 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4105g00001 Mupr-Chr4105 3525 17361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4105g00001 46 617 Receptor kinase-like Gene Family AT1G70520 37.797 1.07e-120 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr4105g00001 Pkinase 5.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4105g00001 - - gmx:100801131 960.288