Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4097g00002 ATGAGACATATTAAAGATAAGGGGATTATTGTAATAAAAGGAGTTTGGGAAGATGAGCTGGCGCAGGGTTTTGAAGTCAGCACAGGCCCTGGCTGCACACACTTTTCTGTTGTGCTTCACTCTTCTCCTCGTTCTCAAGCTCGATCACCATCTCTCTTGATAATATTTTCACCTCTTTGGATGTTCCATGGTGTTGTGGCTCGAGGAAGGTTTTCATTACCTGCGCCATCTGCTCCACGTAATCGAAATTGGGCACCATGCCATGCCGTCGTTGCAACGCCATTGCTTATTGCATTCGAATTGCTCCTTTGTGTATATCTTGAGAGCTTAAATGTTCGTGACTTTGCAGCAGTTGATCTAAAGATAGTGTTTCTTCCCTTACTAACATTTGAAGTCATTATTCTCATTGACAATTTCAGGATGTGTAAGGCTCTAATGCCAGGAGATGAAGAAAACATGAGTGATGAGGCAATATGGGAAACACTTCCGCACTTTTGGGTTGCAATCTCTATGGTGTTCTTCATTGCTGCTACAGTCTTCACACTCCTAAAACTGAGCGGTGATGTAGGTGCTCTGGGCTGGTGGGACTTTATCGCGGAGTGCTTTGCTTTTCTTGTATGTACAAAGTGGTCCAATCCAGTCATTCATAGAAATTCAAGAGAAGCCAGTAGTTCATCTTCAACTACGATTAGATATCTTGACTGGAACAGTGGTTTAGTGGTCTCTTCAGAGGAAGATCAACGTCAAGGGAGAATGTGTAGCCTGCAAGACATAGGAGGTCATTTCATGAAAGTACCAATTATTGTATTCCAGGTTCTTCTTTGTATGCATCTAGAGGGAACGCCTGCTTCTGCTGTATATATACCTCTTCCAGTTCTTTTCTCTCCCCTTTTCCTAGTGCAAGGAGCTGGTGTACTGTTGTCTGCATCTAAGTTAGTGGAGAAACTTGTGCTTCTGCTACGAAGTGGAGCTGCTGGGGGAATATATTTTAGATTTTCTTCAAGAGCTCATGATTGCTTGGGTTTCTTGCACCATGGTTCTAGATTATTAGGTTGGTGGTCAATTGATGAAGGGAGTCGGGAAGAACAAGCACGACTATACCATGAGGGAGCATCTGGGTATAATACGTTCTGTGGTTATCCTCCTGAGATTGTTAAGAAAATGCCAAAAAAGGAACTTGCTGAGGAGGTTTGGAGACTTCAGGCTGCTCTTGGTGAACAAACTGAAATTACAAAATACAGCCAACAGGAGTATGAAAGACTTCAAAATGAGAAAGTATTATGCAGAATTTGTTTTGAGGGAGAGATTAACATTGTATTGCTCCCATGTAGGCATCGTGTCCTTTGCAGCACTTGCTCAGAGAAGTGTAAGAAGTGCCCAATTTGCCGTGATTCTATTGCTGAGCGCCTGCCTGTATATGATGTTTAG 1428 0.4279 MRHIKDKGIIVIKGVWEDELAQGFEVSTGPGCTHFSVVLHSSPRSQARSPSLLIIFSPLWMFHGVVARGRFSLPAPSAPRNRNWAPCHAVVATPLLIAFELLLCVYLESLNVRDFAAVDLKIVFLPLLTFEVIILIDNFRMCKALMPGDEENMSDEAIWETLPHFWVAISMVFFIAATVFTLLKLSGDVGALGWWDFIAECFAFLVCTKWSNPVIHRNSREASSSSSTTIRYLDWNSGLVVSSEEDQRQGRMCSLQDIGGHFMKVPIIVFQVLLCMHLEGTPASAVYIPLPVLFSPLFLVQGAGVLLSASKLVEKLVLLLRSGAAGGIYFRFSSRAHDCLGFLHHGSRLLGWWSIDEGSREEQARLYHEGASGYNTFCGYPPEIVKKMPKKELAEEVWRLQAALGEQTEITKYSQQEYERLQNEKVLCRICFEGEINIVLLPCRHRVLCSTCSEKCKKCPICRDSIAERLPVYDV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4097g00002 475 FunFam Kinesin-like protein KIN-7D, mitochondrial 405 473 - -
Mupr4097g00002 475 Pfam Zinc finger, C3HC4 type (RING finger) 425 467 - -
Mupr4097g00002 475 ProSiteProfiles Zinc finger RING-type profile. 428 463 IPR001841 -
Mupr4097g00002 475 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 404 473 IPR013083 -
Mupr4097g00002 475 Pfam Transmembrane Fragile-X-F protein 53 300 IPR019396 -
Mupr4097g00002 475 SUPERFAMILY RING/U-box 419 470 - -
Mupr4097g00002 475 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 49 475 - -
Mupr4097g00002 475 SMART ring_2 428 462 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4097g00002 Mupr-Chr4097 18342 26936 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4097g00002 54 475 C3H Transcription Factor Family AT1G73950 73.302 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4097g00002 - - gmx:100791390 799.275