Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr4096g00003 ATGTTCCATGTTGCGCTGAATCCTCAACCTCACAATTTCCTCTTTCCCCTCTCCGTTTCCCCTTCTCCTTCTACCTCCCGCAACCTCCACCTTTCACAAACTCTCCAATTCCCCACAAAATGGAATCTCCGCTCTCTCTCGCCCTCGTTGCACCCAACACCGCAATACGACGACTCCGAAGAACACGTCATCGGCGACTGCGTCGTATTCGAGGACGGCGTTTTCGATGACTTCGTTTTCCATAACCACCTCAGTTCCAGCGTCAATGAGGCCAAGCCCAAGTCCTGTTCGAGGAAAAAGAAGGTGGAGGTGATTGCGGGCGAGAATTTGGTTCCGGACAAGTGGCGAGAGGTTCAGGCAGAGATAAACATCACGAAGAAGGAGAGGCGCAAGATAGCGCGGGAAGTGGAGTTCAACCGCAATGTTGACAAGAAGAGAAGAGGGTTAATTCCCCTTAGGGATATGAACTTAGACGACTATAACGCTTATAAGGAGGCTAAATTGGCACAAATGAAACTTCTCGATAACGCTTCTAGTTTTCCACCGAAACAAGAGCTCCCTCAACCTGAATTGAACGGTGCTGCTGCTGAAGAGGTCCCTCAACCTGAATTGAATCTTGGCGAACGCGTACAGCCCCAGAATCCTAGGTGGGTCGTTTATGGAAGGGGTTTGGAGGATGTTACTCGGTTTTTCAATAGTGACAATTATGACCCTGATGCTAAGACCCCTCAAGGTCGGAGGAAGTTGTTTAATAAGGAAGAGAAGGTTTTGTTGAATCGGCGAGTTCCAGACTTGGCAGCTGCTACTTCAGATAAATGGCTACCTCTGCACACTCTTGCTGCATGTGGAGAATTTTACCTTTTAGATTCTCTGTTGAAGCATAATGTTGATATCAATGCTCTGGATAAGGAAGGTTTGACTGCCCTTCACAGAGCAATAATTGGAAAAAAGCAGGCCATAACCAATTATCTCCTCAGAAACTCTGCTAATCCCTTTGTACAGGATAAAGAGGGGGCCACATTGATGCACTATGCAGTACAAACAGCTTCTACCCAGACAGTTAAAACACTCTTACTATATAATGTGGATATAAATCTTCCGGACAATTATGGCTGGACACCATTACATCTTGCTGTTCAAGCTCAGAGAACAGATTTAGTGAGGCTTCTACTGATTAAAGGTGCTGATAAGACCTTAAAAAACAAGGATGGTTTAACTCCACTTGATCTTTGCCTGTACTTTGGTCAAAGTGCAAGAACATATGAGCTAATCAAGTTGTTTAAGCTGCCTCTGAGGCGAGTTAGACATGTATAA 1314 0.4559 MFHVALNPQPHNFLFPLSVSPSPSTSRNLHLSQTLQFPTKWNLRSLSPSLHPTPQYDDSEEHVIGDCVVFEDGVFDDFVFHNHLSSSVNEAKPKSCSRKKKVEVIAGENLVPDKWREVQAEINITKKERRKIAREVEFNRNVDKKRRGLIPLRDMNLDDYNAYKEAKLAQMKLLDNASSFPPKQELPQPELNGAAAEEVPQPELNLGERVQPQNPRWVVYGRGLEDVTRFFNSDNYDPDAKTPQGRRKLFNKEEKVLLNRRVPDLAAATSDKWLPLHTLAACGEFYLLDSLLKHNVDINALDKEGLTALHRAIIGKKQAITNYLLRNSANPFVQDKEGATLMHYAVQTASTQTVKTLLLYNVDINLPDNYGWTPLHLAVQAQRTDLVRLLLIKGADKTLKNKDGLTPLDLCLYFGQSARTYELIKLFKLPLRRVRHV 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr4096g00003 437 ProSiteProfiles Ankyrin repeat region circular profile. 370 402 - -
Mupr4096g00003 437 Gene3D - 342 429 IPR036770 -
Mupr4096g00003 437 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Mupr4096g00003 437 Pfam Ankyrin repeats (3 copies) 320 401 IPR002110 GO:0005515
Mupr4096g00003 437 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 173 428 - -
Mupr4096g00003 437 Gene3D - 221 341 IPR036770 -
Mupr4096g00003 437 ProSiteProfiles Ankyrin repeat profile. 370 402 IPR002110 GO:0005515
Mupr4096g00003 437 FunFam Ankyrin repeat domain-containing protein, chloroplastic 244 341 - -
Mupr4096g00003 437 ProSiteProfiles Ankyrin repeat profile. 304 336 IPR002110 GO:0005515
Mupr4096g00003 437 ProSiteProfiles Ankyrin repeat region circular profile. 337 369 - -
Mupr4096g00003 437 ProSiteProfiles Ankyrin repeat profile. 337 369 IPR002110 GO:0005515
Mupr4096g00003 437 SMART ANK_2a 271 300 IPR002110 GO:0005515
Mupr4096g00003 437 SMART ANK_2a 304 333 IPR002110 GO:0005515
Mupr4096g00003 437 SMART ANK_2a 337 366 IPR002110 GO:0005515
Mupr4096g00003 437 SMART ANK_2a 370 399 IPR002110 GO:0005515
Mupr4096g00003 437 SMART ANK_2a 403 432 IPR002110 GO:0005515
Mupr4096g00003 437 SUPERFAMILY Ankyrin repeat 257 422 IPR036770 -
Mupr4096g00003 437 Pfam Ankyrin repeats (many copies) 275 317 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr4096g00003 Mupr-Chr4096 17671 20995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr4096g00003 276 411 Ion Channels AT2G25600 33.824 5.66e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr4096g00003 - - gmx:113001670 683.715